Genomic Feature

ko377

ID
ZDB-ALT-160217-13
Name
ko377
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Kawahara Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 141505 - 141515 (GRCz11) (1) Details
Nucleotide change
AGGAGCTGCAG/-
Variant Notes
An 11-base pair deletion in s1pr5b, that encodes for 14 correct amino acids  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
11 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CAGGCAGTTCCAGCCCAGCACCGGCAGCGCCCCCAGCAGCACCGCCAGCGCCCAGCTCAGCCCGATCAGCGCCCGCATGCGGCGGCGGCGCCTGGAGCTCTGCTGCGGCCTGGAGCTCCGCATGGTGCAGGCGCGCTCCACTGCGATGGCCAGCAGACACAGCACCGATGCCGCCAGCGTCACCAACACACCGGCCTCCCGCAGGAACCACAGCGCCGGCGTCAGGCGGAGAGTGTTCCGGCCCGACAGCACCACGTTCAGCATGTAGGCCACGCCAGCCAGCAGGTCCGATAGCGCCAGGTTGCCCAGCAGGTAGAACATGGGCATGTGGAACCTCCTGTTCCTGCGGAGGGCCAGCAGGACCGTCAGGTTCTCAGCGATGATCAGTAGGCAGACGCACAGCAGCGCCACAGCCTCGGGCTGCAGGCCATCTCGGTACCGGCCACGCTCCAGCTTCCCGGTGTAGTTGTAGTGGCGCTGCAGAACCGCATTGCTCTGGT
AGGAGCTGCAG/- AGAGGAGAACTGGAGCTGTTGGAGGAGCCGGACGCATCCATCTGCAGATCTCACACACACACACACACACACACACACACACACACAGATGCTGCAGAACACTGCTCTGCCTGGGGGGGGGGCGCTGGAGAGCACTCAGCCCATCCCTGATGAAGACCTGCAGAACATGAAGGAAACAGCAGCAGTCAGCACTTCATCTCAGCTAATATTACTGCAGAAACACCTCAGCATCATCGCCCCCGCCCTGTGCTGTGTTCCTGTCATTTCTCTGACCAGTGCTTCAGCAATCTACACTGGCGGATTCACCGGCCGTGTGTTAAAGGAGGATCAGAAAAGACTGATGTGTGGGACTGTGTCAGAGCTGGACAGAACTTTACAGCGCACACTTCATGATCAGTTTCTTCCTCCATTTCACAAGTGTCAGTAAGTGCGATTAAACTGGCCGCCTGCTCGTTTTCGTGTGCTGTATCTGGTTAACTCTTAAATCCTCATATCGCATG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations