Genomic Feature
s3001
- ID
- ZDB-ALT-150721-10
- Name
- s3001
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Baraban Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 5: 28973294 - 28973305 (GRCz11) (1) Details
- Nucleotide change
- CTCAGGATGGCA/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 12 bp deleted (1)
- Transcript Consequence
- Start Loss (1)
- Protein Consequence
- None
- Flanking Sequence
-
GTAAAATAACGGGTTATCATACTGTAGATGGCTGTCTTACATACATATTCATTTAAATAATCCAAACGAGCAAAGCATCTCTGAATGGCCACTTAAACGCGGCAGGATAACAAGTCGATGTCTCCCTCTAGTGGGCACCAAGTGGTCTTTTCGCGCATCTTACAGGCGCACCTATTATTAAACAGATTGCAACCATTCTCACCCAAACGTCACTATTTTCATCACGTTAATTTCATATCCTATGCAAATTCGTTGAGTTCACCTTGTTAAAGCATATGCTCCAAAACCACTTCAGGCGTGAAACATGATGAAATCTGCGTAGAAAGCTGAGCTTCATAGATGCACAAATGTGTGTATGTTTACAAGACACGCTGCATATGTCAACAAAGGAGCTGCGGAGGCGTGTGCTGGGATTAGCCATCGACGCAAGAGCCACATCCCATTTACACCAACTGTAGATCCGAGCGCGCGCACTCCGAGTCCGGCGGCGAGAGCGAGCA
CTCAGGATGGCA/- TCTCTGGGACTCAAGGCGATTGTCGGAGAAAGTAAGACATGTTTTCCTTAAGTTTATGTATGGCAGATATACGGCTGTTTTTGGACCGGACATGTTGAAAATTTGTAACGTGTGGAGTTAGTGCCATTTTCATTGACATTTGTACTTTGTGTAGTACTGTACATGTTAGCATGAAGGGTGTGTTAATGTATTATCAAATATTAGTTGGCCCATACTCACAAACAGTAGCCTATAAACCTCATACAACAATACAGCTCTACTTAAATTCTTATATTGAAATTGCTTAATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATAATGAGTGTCAGGCGCTACACATTACATAGAATAACTGATATTGCTAAAAGCACACAAGCATTTGAGATAGGCTACACACTAATCTGTGTAGTCCTGTGGGATTAGGGATCCAGATATGAGGGGCGGCTCATAGTCC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None