ZFIN is now using GRCz12tu for Genomic Data
Gene
trappc1
- ID
- ZDB-GENE-040718-242
- Name
- trafficking protein particle complex subunit 1
- Symbol
- trappc1 Nomenclature History
- Previous Names
-
- zgc:100969
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in Golgi apparatus and endoplasmic reticulum. Predicted to be part of TRAPP complex. Orthologous to human TRAPPC1 (trafficking protein particle complex subunit 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7147861 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Longin-like domain superfamily | Trafficking protein particle complex subunit |
|---|---|---|---|---|
| UniProtKB:A0A8M9PT12 | InterPro | 146 | ||
| UniProtKB:Q6DGD9 | InterPro | 145 | ||
| UniProtKB:F1QJL7 | InterPro | 145 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
trappc1-203
(1)
|
Ensembl | 661 nt | ||
| mRNA |
trappc1-201
(1)
|
Ensembl | 633 nt | ||
| mRNA |
trappc1-202
(1)
|
Ensembl | 622 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers