Transcript

frmd5-202

ID

ZDB-TSCRIPT-160623-326

Name

frmd5-202

Previous Names

frmd5-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

frmd5b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000063557 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000063557.5|ZDB-TSCRIPT-160623-326 cdna: chromosome:VEGA67:7:29879846:29903565:-1 gene:OTTDARG00000043765.6 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay gene_symbol:frmd5 description:FERM domain containing 5
CAACTGCACGGTGCGACTGCTGGACGACTCGGAATACACT
TGCACGGTTCAGAGGGATGCAAAAGGTCACTGGCTGTTTG
AGCAGGTCTGTCAGCATCTGAATCTGCTGGAGAAAGACTA
CTTTGGCATCCGATTTGTGGACCCAGACAAGCAAAGGCAT
TGGCTGGAGTTCAGCAAGCCAATTACCAAACAAATGAGAT
CCGCCGTACACTATGTGTTTACGTGTAAAATTCTATCCCC
CGGACCCTGCGGCACTTAAAGAAGAGATCACTAGATACCT
GCTCTTCCTACAGATTAAAAGAGATTTATATCATGGCCGA
CTCCTGTGCAAAAGTTCAGACGCTGCAACGCTGGCTGCAT
TCATACTGCAGGCTGAGATTGGAGATTATGACCCGGGAAA
GCATCCGGAAGGATACAGCTCTAAGTTTCAGTTTTTCCCT
AAGCATTCTGAGCGCCTGGAGCGCCGCATTGCTGAGATCC
ACAAATCTGAGCTGACTGGTCAGAGTCCTG

Related Transcripts

Transcripts related to frmd5b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	frmd5-202	Havana	510 nt
mRNA	frmd5-001 (1) Ensembl	Havana	5558 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	frmd5-205 (1) Ensembl	Havana	783 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	frmd5-003 (1) Ensembl	Havana	789 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	frmd5-005 (1) Ensembl	Havana	695 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations