ZFIN Transcript: sned1-201

Sequence
OTTDART00000054637 (1) [ Show ] (double-click sequence to select)
>tpe|OTTDART00000054637|OTTDARG00000038133|ZDB-GENE-100913-1 sned1|OTTDARP00000042900 sned1-001 LG_none BX890577.6,BX890558.11 Danio rerio protein_coding NOVEL, 5442 bp
GGATATTTCTAAACTAACCATCAGGGACCAAGTCACTGGA
TTGTAAAAAAAAAAAAAAAATACATAGAGCCGAATCACTC
TGCTTCCCCTCCTTTCTCTCTCTCACTCTGTTCATTTCAG
CACGGAGCACGGCAGCTCTTGAGCACCCAGCAGCACACAG
AATGCAAGGAATCTACCCCCTTGCCTTAGACCAACAACCC
AAGTACCAGGGCTGAGAGAAGATCTGAGAGGAATCAAAGG
TTGGAATTAAAAACCTAAAGAGGAGAACTGACATAATTTT
ACAGGGAAAAGAAACACAAGGAGAGGATCATTGGTTGAAT
ATTTGCCACTGGAGTTAGAGTTGTCTTGTTATCCTCTTTG
AGTGTCCAGGACTCTACTCCTCTCCTCTCCATCCCTGTGC
CGACAAGGTCATGGGGAGGCTGAGGAGACCGGTGCTCTCC
ATGTGCACGCTGCTTATATTGCTTCATGGCGTAGAGCCGG
CTGTACCCCTGGAGGAGTTCTACCCATTTGGCCTGGATGA
GGGTGACTCTCAGACCATTGAGCAAGATGATGGGGGATCA
GGACTGGTAGCCATATCAGTGGCTTTCCCTTTTTTCGGAG
AACGGCACACTGGACTCTATGTCAACAACAATGGCCTGGT
GTCTTTCTTGAGGGAGGTGTCCCAGTTCACCCCTGTGGCA
TTCCCTATTGCTGGTGACCGAAGAGTGGTGGCTCCATTCT
GGGCTGATGTAGACAACCGACGAGCAGGGAAAGTCTTCTA
TCGTGAGAGCAAAGATCCTGCTATCCTGAGAAGAGCTACT
GCAGATACTAATCGTTACTTTCCGGAGTTCCCAACATTTG
TGACCACATGGGTGCTAATTGCTACCTGGCATCAAGTCAC
ATTTTTTGGTGGCAGCTCAATAACTCCGGTCAATACATTT
CAAGTAGTTCTCATCACAGATGGTGAACTCTCCTTCACCA
TCTTCCAGTACCACAATATTACCTGGACAACAGGAATGCA
TGCTACCAGTGGTGGAGATCTCGCTGGCTTAGGGGGCATA
GCTGCGCAGGCAGGTTTTAATGCTGGTGATGGGAAGCGCT
ATTTCAACATTCCAGGCTCCCGAACAGATGATATTGTTGA
AATTGAAACCACTACGAATGTGGGATATCCTGGTCGTTGG
GTCTTTCGTATTGATGATTCTCATGTTCAAGTGGGTGGCT
GCAACGACTCAGCTTCAGTCTGTGCCAATTTAAGGCCCTG
TCGAAATGGTGGACGTTGCATTGATGACTGCATCACTGGA
AATCCCTCTTTCACTTGTTCGTGTTTGGCTGGATTTACTG
GACGCAGATGCCAGATAGAAGTTGATGAGTGCTCCTCATA
CCCCTGTCAAAACGGAGGCACATGTGTGGACAAGATCAAC
CACTTCATCTGCCTGTGCCCAGTGGGATTCATAGGGGCAA
CATGTGAGACAGACATAGACGAGTGCCAGGAGACCCCATG
TCTCAATGGAGCACAGTGCATACAGGGTGTCGGCAACTTC
ACCTGTAAATGCCAAGCAGGTTACACTGGGTTCCTATGCG
AGTCAGACATCAACGAATGCATGTCAGTGCCATGTTTGAA
TGGAGGTGTGTGTGAAGACCTGGTAAATAACTACACCTGC
ACCTGTACAGCAAACTTCACTGGAAGCGCATGTGAGACAG
AGTTGGTTGTTGCTGATGCTGCAAATCAGACAGAATCCTG
TGTTGGAGAGATTTGTAATAAACATCAAATCTGCGAGTAC
ACTAACTCTGGAAATTACAGCTGCACCTGCATGCCCGGAT
ACTACGGTGACAACTGTGAAGAGGAGTGCCCCTGTCAGAA
TGGAGGTATTTGTGTTGATGTGAATGGCACTTGTGACTGT
CCTACAGGCTTCACTGGACTCTACTGTCAGTTTGAAGTAA
CACAAACACCCTGCAGTAACAACAGGCCATGTCCAGATGG
AGGTCCCTGCTTGGAATATGGTGGCACATACCTTTGCACC
TGCCAAACTGGTGCCGAATTTGATCACAAGGATTTCTACC
CCTATGTACAGCCCCAATCAGCCTGCGACTCCTCTCCGTG
TCAGAATGGAGGGTATTGCTATGAAAGAGATGGAGACTAC
ATCTGCGAGTGCAAACACGGCTACAGAGGCAAGCATTGCG
AAAGAGTCAGATTAAGTATCTGTGCTTCTAGTCCCTGTCG
TAATGGAGGTTCTTGTAAAGAAGAAGCTGACAGCTACCAT
TGTGTCTGCCCCTACCGTTTCACAGGGAAACACTGTGAAG
TGGGAAAGCCAGATCCATGTGCTTCCAGTCCCTGTCGAAA
TGGGGGAACATGTTTCCACTACATCGGTAAATACAAATGC
GAGTGCTCCCCGTCCTTCATGGGAAGACACTGCGAGATCA
ACAGAGGCTCTAATCCAGCTTTGGAGGGTCTAGACTGTGG
CCCCCCTGTGAAAGCTAAGCATGCAGAGGTACAGTATTCC
TCCACTACTCCAGGCTCCATGGCTCTGTATTTATGCCACC
CAGGCTACACTCCCCTCACTAGGGCCACCCAGATCATCTG
CAGCAGCCAGGGGTCCTGGAGCCAGCCTCCAGTCTGTGAA
GAGATCAACGAGTGTTTGTCTCAGCCATGCATGAATGGAG
GAACTTGTCGTGATCGTGTGGCCTCTTACCTTTGTGAATG
TGAAGAGGGTTTCACCGGTCAGCGCTGTCAGACAGATATG
GATGAGTGCCTTTCTGAGCCATGTAAACATGGAAGTACAT
GTGAGGATCAGCCTGGCTCTTACTTTTGCCACTGCCAAGA
GGGCTATGCTGGACAAGACTGTGAGATGGAACAGGATGGA
TGTGAGCCAAATCCCTGCTTAAATGGAGGTATATGTCGAG
GCTACAGGAGGAACCACCTGTGTGTGTGTAAAGAGGGTTA
CATTGGAGACCGCTGCCAGACATTGGAGAACCCCTGTGTA
CTGCAGCCATGTGGGAACCGAGGTGTCTGTCGGAGTGATA
GGAGGGGGAACTACAGCTGTGCCTGCAGGGTGGGCCACAC
AGGGAGAGACTGTGAGAGAGATCTGTTGCCTCCATCTGGC
CTAAATGTGTTGCGGGTAGAAGAAAATGAAGTGGAGCTAC
GCTGGGATCAGTCAGATGTCACTCAGAATTTGATCAGTGG
CTTTGCTGTGGCCTTTGCTCCTGTTGGCCGTGTACCAAGA
AAGACAGACTTCCTGGAGAAAAAGCATTCCACCTATGTGT
TGCAGGGTCTGAACCCCGGACAGCTTTACAACATCTCGAC
CTACTCCGTCAACAGCATTGACAAAAGCCAGCCAGCTTTC
GCTCTTATCCGGACTAGGCCTCGTCAGGTGGATCAGCTGG
AGGTAGTGAACGTGTCGTCCTCTCAGGTTTGGCTGCGGTG
GTTGGTGCATGTTGGACGTCATGCTGCGATCAGTCAGGTT
CGAGTGTCTCTGGTGCCAGCTGATGGTAGTGGATCTCGCA
CGGCCGTTCTCAACAGCAGCGTCACAGATTACACCTTCAG
CACATTACTCCCAGGTCAGATGTACACAGTAGACGTAGTC
ACTCAGAGTGGTTTGCGCCCTGAAGACCTGCCATCAACCA
GCAAATCTGCCGGGCCCCTACACTTCTGGACCAGACCGCT
TCCACCTCAAAATCTTTCAATCTCCCATATCACCACCACC
TCTGCTCTGGTCACATGGGACCATCATCCTCAGAGTCTTC
CAGATGGTTTTGTGGTCAATATTACTCGAGGTCTGAACAC
CCGCAGCCGATACCTACCTGGAGGAAGTTTAGGCACATAC
ACCCTACGAGATCTCATTCCGGGACAACACTACCGACTTA
CCCTCACTGCTGTACGCAAAACAGGCCAGGACAGCATTCA
CAGCGTCCCTCAACACCTAGCCTTTGCTACACTACCAGTA
AAGAGCACTAGCAGAGGTGACAGACCTCAGGGTGGACAGG
ACTACCAGATGGGGCAGACTTTGACACAAGTTCAAGATGG
AGGCACAGATGAGAACACAGAACTCCTTGAAGAGCCACTA
AGATATACAGAGCTTATCGACGGAAGGGGGAGAATTACAG
CTAAATTTACCAAACTTCCACATAAAACCATCAGACACCG
CATTAAGCCTGATCCTCCAATCAAATTAGAAAGGATGGAA
GAAACCACAAATAAGATTAGTCTAGCTCTGGAAATTCCTG
AAGAAGCGTCAAAGAGTAAATCTGAGTCATCTCAAGACTG
CAGAACTCAGCCCTGTCAGAATGGTGGAACGTGTGCACAG
ATCAACGAGTCCTTCAGCTGCAACTGTCCAAGCGGTTTCA
AGGGCAGACGGTGTGAGCTATATTGCCAGCGAGTGTCTCA
CCCATGCACTCGCCTTTACTCCGAAACAAAGAGTGTGCCT
GTGTGGGAGGATGGTGTCTGCCATTATTTGTACAAAAGGA
CATATAAAGTTCAGCAGGATGTTTGTTTTAGAGAGATCTG
TGAGCCTTTGCTGCCTAAGAAAACTCCACACAGAAGAACT
CAAAAACATCAATAATATAGGAGGCTGAATAAACTTTGGG
GAGTAATTACTTCTCTCGATTAAAATGAGGATGCATTACC
ATCATCGTTGGTCCATTTTTGCATCACTGGTCACCTTTCA
TTGTCTGTATTGTTCTATGGACCATTTTGGTCAAATACAA
CTTCAGATCTGTAAATGACCTTCAACCATATGATTTAGGA
GATACCTGCATCAGTTAGCATACCTCAAATGTAAATATTA
TGAGATACTGAAATGTAGTGGCCGTCAAATCCCTCAGGGA
ATTTTTTTTTTTTTTTTGTAATTATTGCCTGTTCAGTTTT
TAAAACATAAAAGCATTTCCATTCAACAGTTCTTTAAAGC
CTGGATCTCTTCAACAGAAAGATTGCACAAAAATAATGAG
GAAAAAAAAAAGTCGCACCGTTGTTTCTGTTTGTGTAAAG
CAAAACTCTTTGCTAGCTACCGTGTAAATAGTGTTTATAG
TCTGTGTTTTTGTAGTTGAATATTTTAATAATAAAATTGT
TAAAACGTCAGGAGACCTTCTGTTTTTAATGGGAAAGGCT
TGTATACAGGGGAGAGGATTTCACCGATACACCTTATTGA
ATCACCACAAGATGTCGCTATATTGTAAAAAGGAAATAAA
GGTTGAAGTAAGAGTTCAACCAAAAATGAGAAGTACCACA
CTCTATTTTTGAACACAAAATAGTCAGTTGATAGCCAGTA
TCCACTGACATATTTAGTAAATTTGATTTCTACAATATCT
TTTGAGATTGTAGCTTCAACTCTCAACTTTTGGGTGAACT
ATTCCTTTAAGAACTGTTCTTTTATCAGGCAACGTTTTAT
GACGCTGATGGTCTGGCTTTATGGAACATGAGACTTCTTC
CTTATCTATGAAAATAAGCTATAAACAATATACAGAGAGC
AT
Related Transcripts
Transcripts related to sned1
Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sned1-201	Havana	5442 nt
mRNA	sned1-202 (1) Ensembl	Ensembl	4017 nt	Select Tool ZFIN BLAST
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations