Transcript

si:dkey-156n14.5-202

ID

ZDB-TSCRIPT-120213-373

Previous Names

dkey-156n14.5-002
si:dkey-156n14.5-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

ddx17 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000054768 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000054768|OTTDARG00000038221|ZDB-GENE-030131-18 si:dkey-156n14.5|OTTDARP00000042986 DKEY-156N14.5-002 LG_ CR626864.10 Danio rerio protein_coding NOVEL, 2148 bp
ATGAGAGGAAGTTCCTCATATGGAGACAGAGACAGAGATC
GAGGACGTGATAGAGGGCCTCGCTTTGGTTCTAGTCGTGC
TGTCCCACCCCCACCGAAGAAGTTTGGGAATCCGGGAGAT
CGGCTAAGGAAAAAGAAATGGGACCTGGACCAACTACCCA
AGTTTGAGAAGAACTTCTACAATGAAAACCCAGAAGTACA
TCACATGAGTCAGTATGATGTAGAGGAATATCGCAGAAAG
CGAGAGATCACCGTCAGAGGCTCTGGCTGTCCAAAACCTG
TCACCAACTTCCATCAAGCTCAGTTTCCTCAGTATGTAAT
GGATGTGCTTCTGCAGCAGAACTTTAAAGAGCCCACTGCT
ATCCAGGCTCAAGGTTTTCCTCTAGCTCTCAGTGGCAGGG
ACATGGTGGGCATCGCTCAAACTGGCTCTGGAAAAACACT
GGCTTATCTGTTGCCTGCCATAGTCCACATTAACCATCAG
CCATATCTGGAAAGAGGGGATGGGCCCATCTGTCTTGTGT
TGGCACCTACACGTGAATTAGCTCAGCAGGTGCAGCAAGT
GGCTTTCGACTATGGCAAATCATCCCGGATCAAGAGTACC
TGTGTGTATGGAGGAGCCCCTAAAGGGCCACAGATCAGAG
ATTTAGAAAGAGGTGTTGAGATATGCATTGCCACTCCTGG
CCGTCTGATTGACTTCCTGGAGGTAGGAAAAACCAACCTG
CGTCGTTGCACCTATCTGGTGCTGGATGAAGCTGATCGTA
TGTTGGACATGGGATTTGAACCCCAAATACGCAAAATTGT
AGACCAAATTAGACCTGACCGACAGACTCTAATGTGGAGT
GCTACCTGGCCTAAAGAAGTGCGTCAGCTGGCTGAAGATT
TCCTCCAAGACTATGTCCAAATCAATATAGGAGCTCTAGA
ACTGAGTGCGAACCACAACATCCTGCAGATAGTAGATGTC
TGCATGGAAAATGAAAAAGACAACAAGCTGATTCAACTGA
TGGAGGAAATCATGGCTGAAAAGGAGAACAAAACCATCAT
CTTTGTCGAGACGAAGAAACGTTGTGATGAACTGACTCGC
AGGATGCGGAGAGATGGGTGGCCTGCAATGTGCATTCATG
GTGACAAGAGCCAGCCAGAGAGGGACTGGGTACTAACAGA
GTTTCGCAGTGGAAAAGCTCCAATTTTGATTGCCACTGAT
GTCGCTTCACGGGGTCTGGGATTTTTGACTTCCTAACTGT
GCCTGCCCAGGCATGCTGTGCCATTTTGACACAGCGGCCT
CCCTCTACCATGTAACCAGACAGTAGCACAGGGCTTGATA
TGGATAGACTCCTTCAGCTGCACCCTAATTTATCTCGACT
ATAAAGCGGGCCAGTGGAATCAGCTGGCTTTTTACCTCAA
ATAATGAATTGACCATTTAAAAAAAATCTCAAGCCTGTGG
CCCCTCAGGGCTCTGTTAGATTCCAGGAAGGTCTGCCCTT
AAGATAGATCTGGGGTTGATTGGCTCACGGAGGGATAGAG
AGAGAGGGAGAGAGACAGTTAAGAGTGCTGGATACAGTCC
GGTCCAGTTTGTGGAGGTCCTGCAACCCAGCGAGAGAGAG
AGAACTGGGGCAGAGCCGGTTCTGCTCCCGCCTGGCGTTG
CTGGGGCAGGGCCGAGGGTGAAGGGGGGGCAGCTCAGCGC
GTCAGCCCACATTAACCTCTTCCTCTTGGGCCGCTCCACG
GGACCCTGGACTGATCCCAGCCAAGAGTAACCTAACCTAG
GATGTGGAGGATGTCAAATTTGTCATCAATTATGACTATC
CAAACTCTTCTGAGGATTATGTTCACCGAATTGGGCGCAC
AGCCCGTAGCACCAACAAAGGTACAGCCTACACCTTCTTC
ACGCCTGGAAACCTTCGCCAGGCTCGCGATCTGGTTCGGG
TTCTTGAGGAGGCTAGACAGGCTATCAATCCCAAACTACT
GCAGCTTGTGGACACGGGCCGTGGAGGAGGAGGTGGAAGG
ATGCGTTACCGTGGCAACAATTCAAGCTCAAATAATCCCA
ACCTGATGTACCAGGATGAATGTGATCGGCGCATGCGCTC
CGGAACTGGGGTGAACAAAGGCGGCCGCAGCAGCAACAAC
AACAACAACAACTTCAGCCGTGATGGAA

Related Transcripts

Transcripts related to ddx17

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:dkey-156n14.5-202	Havana	2148 nt
mRNA	si:dkey-156n14.5-201 (1) Ensembl	Havana	2975 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations