Transcript

phf11-204

ID

ZDB-TSCRIPT-100915-16

Name

phf11-204

Previous Names

phf11-002
dkey-46k9.12-002
si:dkey-46k9.12-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

phf11 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000033863 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000033863|OTTDARG00000025695|ZDB-GENE-081104-417 phf11|OTTDARP00000027380 DKEY-46K9.12-002 LG_ BX537139.17 Danio rerio protein_coding NOVEL, 1971 bp
CAGTTTCAGTGAAAACAGGATGAGACGCTGCTACTTTTGA
ATCTCAACGAGCATCGCTCAACATGGGTTCTGGTCAAAGT
CCATCAACGTACAGAATAATTTGCGCCCTGTGCAAAACAT
CAGATGAAACCGAAACCACTGGACCACTGTCATCCAAAGA
GGACATCTCTGCACACCAAAACTGTTTGTTGTTTTCATCA
AATATCTACTGCAAGAACTCACCCACATATGATGACCTGT
TTGGTTTTGATTTGGAAGATGTAAAGAAAGAGCAGCGGAG
AGGACAAAAACTTCGTTGTTACTTCTGTAACAAAACTGGT
GCTACAGTAGGATGTGAAATAAAGCGATGTCCACGATCAT
TTCATTATCCTTGCGCCATAAAGGCCGATGCCAGAGCAAT
TGAAGACTTCTCTACAGGCACATACAGAGTGTATTGTAAA
TCCCATGATCCAAACCCCATAGAAATAAATGACGAAATTG
ATAACGATGTTGACCTTGTGTTGGCTTCAGTGGAGAAACA
TGTACCTGCAGAACAGCACAATCAGTCAACTCCTGACCCT
GAACGTACAAGGCCCAGTGAAGAAGTCAAGACACCAGCAA
AAGCTTCATCAAATGGAGGTTTAACATCTGATCAGAGGTC
TTGTGGGACAGCAGACAAGCGCAGGGTCAGAGCATACATA
ATCTAGCACACAATCTCCTTCTCATAAACTAATGGCATTT
TCCTTAGTGCAGTCGTCATCATCACCATCTAAAAAACAGC
CTGTATTGAATGTGATTCTCAAGAACACTCCCCAGAACAC
AAAACACCCACCAAAAAGAAAAAAAAGAGACGTCTTGAAT
ACCCAGATAATGAAAACCCAACCAGTGCTGATGCTGTAAT
GGCTCCAGAAGTTTCAGCTCCAGAGGAGTCCATGACTGTT
AACCAACCCAACCATTCCACTCCTCTGCCTGAAAATACGA
GGTCCTGTGAAAAGCTCAACCTATCAACCACAGGTGCTGC
TGCTGATGATGAGGATGATGAAACTGACATTGAATCAGAA
GAGTCTCAGAGTGTGTTAACATATGAAACGGACCCTGTGC
CATGTATTGTTATTTTAGATTCGGGACCCTCATTGGAATC
AGAGATCAGTCTAGAATCTTGTTCTTCGAGAAATCCTAGT
CCAGCACATGAGTTCGTCACTGTCCCTAAACAGGAGAAAA
TAACACCCACAGATAGAACCTCTCCAGCTCAAACTGTCAC
ACCACAAGTACCTGCGCCAAACCAGAAGCGTGTGAGCGAT
GGTCCATCAGTGTCACCACAGCATCCAAGCCCCACAGCAG
GCTTAAGAATATCTGCAGTATGCACACTAGCACAATCTGC
CATCAAAAAAGAGCAGCTGTCAGATCCTCCAGCAGAAGTA
AGCACTAGTGATTCACAAAGCACTGTGCCGAACTGCCAGA
CCCGAGCTGCCAAATTCTGGACGAGATGCAATCAGGCCGG
GTGGAGTGAAGGAATCTTCTCAGAGCTCATGTCTCTGCTG
CATAGCCTGGGACAAAGAGTGCAGTCGGGGCAAGCCAGTT
ACCAGGACTATGAACTTGCTTTCGAAGCACTGAAGGGATC
TGGACAACTGCCTTCTATCATTGCTCAGATAGAAAAAGAT
TTAGAGAAGCAGGAACAGGATTTACAGATGAAAAAAGCAG
CACTGTGTGATGCCAAAGCTGCACTGGCTGATTAATATAT
TACTGTATAATAGTGTTGTTATCATGCAGTTATTATTGTT
AAAAGGAACAAAACTTCCTTTCTGTTTATAATTCAAAAAA
CATGATCAAGCAGTCTTTTATAAATGAGTGATGCACGAAA
TGTTTACAAAAATGTTAGGTTTAAGTTTTCGATAGTTTTA
GATCAGTGACAACAATATCCTGAAATGTACCACTGTATTT
TGATATCCGTTCTATTTTCTAAATAAACTGAAAATTGCGG
ACAGTAAGAAA

Related Transcripts

Transcripts related to phf11

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	phf11-202 (1) Ensembl	Havana	789 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	phf11-204	Havana	1971 nt
mRNA	phf11-201 (1) Ensembl	Havana	1914 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	phf11-203 (1) Ensembl	Havana	936 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations