Transcript

pitx2-201

ID

ZDB-TSCRIPT-090929-9526

Name

pitx2-201

Previous Names

pitx2-002
pitx2c (1)

Transcript Type

mRNA

Annotation Status

Annotation Method

Havana

Associated With Genes

pitx2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

This transcript is commonly referred to as the pitx2c splice variant.

Sequence

OTTDART00000026935 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000026935|OTTDARG00000021245|ZDB-GENE-990714-27 pitx2|OTTDARP00000022079 pitx2-002 LG_ BX511223.6 Danio rerio protein_coding KNOWN, 1947 bp
GATGTGCAGGAGAGTGTGTGTGTATGCAAGTGGATATAAT
ATCACATACCTGTCCCTGTCACTCTGGCTCTCCTTGCTCT
CGGCTGAAACCGAGATATCTTTTACCCAGTCGAAACGGGA
AAAAAATCTTTCCTTAACACTGGGCTTGTTTAATCATATT
TTTTTATTATTAAAGCCGTTTCAGGAGTGTCGCTTTTAGT
GGTTTAAATGAGAAAGGAGCACTGGCAACGCTTGCCGATA
CTTCACTGCTGGACACATTCGTTTCTTTCTTTCTTTTATT
TCTTTTATTTATTTATTTATCTGTATTTGTGACCTGCGCT
GAGGAAGTTATAGCTGCTTGCGAGCCGTCGGTAAATCGCT
TGTCTTATCCATGACCTCTATGAAGGATCCGTTGAGTTTG
GACCACCATCATCACAATCACCACGTTACCGGGAGTAAAC
ACGCGCCGCTTTCGATGGCCTCTAGTCTGCAACCGCTTCA
GCGGTCTGTGGACTCGAAACACAGGCTGGATGTGCACACG
GTTTCAGACACCTCCAGTCCAGAGTCCGTAGAGAAAGAAA
AGGGACAAAGTAAAAACGAAGATTCGAACGATGACCCGTC
GAAAAAGAAGAGACAAAGGCGGCAACGAACGCATTTTACT
AGCCAGCAGTTACAGGAACTGGAGGCCACTTTTCAGAGGA
ATCGCTATCCGGACATGTCGACTAGAGAGGAGATCGCCGT
TTGGACAAATTTAACAGAGGCCAGAGTCCGAGTGTGGTTC
AAGAATCGACGGGCAAAATGGAGAAAAAGGGAGAGGAATC
AACAGGCTGAGCTGTGTAAAAACGGTTTCGGCCCTCAATT
CAACGGACTTATGCAGCCCTACGATGACATGTATCCCAGC
TATACGTACAACAACTGGGCTGCAAAGGGACTCACGTCGG
CCTCTCTGTCTACCAAAAGCTTTCCTTTTTTCAATTCCAT
GAATGTCAATCCGCTGTCGTCCCAGACCATGTTCTCTCCA
CCTAACTCTATCTCTTCAATGAGCATGTCCTCCAGTATGG
TTCCGTCTGCTGTCACCGGTGTACCAGGATCAAGTTTAAA
CAGCCTCAATAACTTGAATAACCTCAGCAACCCCTCTCTA
AATTCGGGGGTTCCCACGCCGGCGTGCCCTTACGCCCCAC
CGACGCCTCCGTATGTTTACCGGGACACTTGTAACTCCAG
TCTTGCCAGTCTGAGACTGAAAGCCAAGCAACACTCGAGT
TTTGGATACGCGAGCGTGCAGAATCCGGCCTCCAATCTCA
GCGCCTGCCAGTACGCAGTGGATAGACCGGTGTAAGAGAC
GACTGTAGAATTTACAATCCGAATCCCAGGAACAAGAGAC
TTCACTTTTTGTTTCAATGGCACTAGAAGAATAAACCACT
GAAACGCGTCCAATCCTGTGATGGAATGTCAAGCGGGAAC
GGAAGGCAAAGGCTCCATTGCTAATAAGATTTGTTCTCTA
CACTAGCAAGTGCACACTAGCCAGTGAAGAGATTAGGATA
CCACAATATTTAACAACAAAAAAAATCTCATTTATTTTGA
CGTTTCAATTTTGGACAGTAATTGACTGAACGGTTGTATA
TAGGCTATACATATATCTTAATATCATCTCCAATTTGTAG
AAGCGAAAGCTCTAACTCTTAAGCATTTTCAAGAATTCAG
TTCAACACAGCATGTGGAAAACTTACAGGAATCATGTCTT
GCTTGCGATCAAGGGAATGTACATACTAAACGCACCAGTC
GTGTGTGATATTATAAATTTATTATTAAATGTCTGTGTGA
ATATAGATCTAGAATAGCAACCCTGGGTAATAATACGCAA
ATGTTTCTGCGAAATGAACTTGGTTTTTGCTCTGTGTATA
ATATTTGGTACGGAATTTTTGTTTCGTTTTTCAACATCCC
AAAAATAAACTATTGTGTTTTATTTAA

Related Transcripts

Transcripts related to pitx2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	pitx2-201	Havana	1947 nt
mRNA	pitx2-203 (1) Ensembl	Havana	1887 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	pitx2-003 (1) Ensembl	Havana	804 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	pitx2-004 (1) Ensembl	Havana	488 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations