Transcript

sfpq-204

ID

ZDB-TSCRIPT-090929-4094

Name

sfpq-204

Previous Names

sfpq-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

sfpq (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000018475 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000018475|OTTDARG00000015419|ZDB-GENE-040426-2452 sfpq|OTTDARP00000042679 sfpq-002 LG_none BX957260.10,CR749172.5 Danio rerio protein_coding KNOWN, 2273 bp
AGAGTGCGCTTTCAACACGTTGGCACTTTAAGGGGTGGAG
TTTCTCGTTCACGTCATTTCTCCCATTTTTACAGTCTTTT
CTTGCAGCCAGCGGCCATTTTACAAAGCTGCCGCCGAGCG
TGAGGGTGCTCCTCTCTTTGTCGGTGTTTATCGTTACAGT
TGCATTTAGTACGTGATTTAAAACTCACCAATATTCATTT
TTATACGGTTTATCCCGTCCGCTTCTGTGTGATAATGTCT
CGTGACCGATCTCGTAATCGTGGAGGATTCCAGCCCCGAG
GCCGCGGAGGAATGGGGATGCGCGGTGGCATGGGCATGGG
GATGGGTATGGGCATGGGAATGGGAATGGGGATGGGGATG
GGAATGGGAAACCCGAACTTTCGAAATCAAAACCAGCACC
ATTTTCAAAACCGAGGCCCACAAATGGGTGGTGGATTTAG
GCAGAATCAGGGAAATCAAGGCAACCAGGTATCTACACAA
CAGAAGCCGCAGGAACCCGCACAGAACAAGCCCGTCGTGC
AGACTCCTCCTGCGCAAGGCCCCGGTCAGGCCCAGCAGGC
CGCCAACAAAGGCCCGACGCCCCAGCAGACTCCCACCGTC
GCTCCGCCGAAAATCCAGTCTGCTCCACCGAAGATCCAGT
CTCCTCCGCCGAAGATTCAGTCTCCTCCGCCAGCACAGAA
TAACGCGAAGACGCCAGAAATAGCTTCCCCTCAAAACCAG
CAAAGGAAGAACCTACCCAAACCCGCGATGGGGAATGGCC
AGAAGCCGCCTGCTCCCTTGAAGCAAGAGCAGACGCCAGC
ACCAACACCCCCACCAGCACAACAACAGCAGCAACAGCAA
CAACAACAAAAACAGACTCCCGCAAACGAGCAGAGCTCTC
AGCCCCAGGAATTGAAGGCAACGCTCTCTTTGCTGCGCAA
GCCTGGGGAGAAAACATACACCCAACGTTGTCGTCTTTTT
ATCGGGAACCTTCCAAACGACATCACTGAACCCGAATTCA
GGAAATTGTTCGCAAAGTATGGGGAACCCAGTGAGATTTT
CATCAATCAAGGCAAAGGCTTTGGATTCATCCGTCTGGAA
TCCCGTGCCTTGGCAGAGGTTGCGAAAGCAGAGTTGGATG
ATACTCCAATGAAAGGCAGACCACTCCGAGTTCGCTTCGC
TACTCATTCTGCTGCACTTTCTGTGCGAAATCTATCTCCG
TTCGTGTCCAATGAGCTGCTGGAGGAGGCATTCTCTCAGT
TTGGACTGGTGGAAAGGGCTATAGTCATCGTGGATGACCG
TGGACGCTCAACAGGGAAAGGCATTGTTGAGTTTTCTTCT
AAGCCAGCTGCCCGCAAGGCCATGGATCGCATTAGTGATG
GGGTGTTCCTTCTCACATCGTCCCCCCGTCCAATTGTGGT
TGAATTGTTGGAGCAGTATGATGACGAGGACGGTTTGCCC
GAGAAGCTTGCACAGAAAAACCCCAGTTATCAAAAGGAAC
GAGAGCAACCTCCTCGGTTTGCCCGTCCTGGCACCTTTGA
GTATGAATACTCCCAGCGATGGAAGTCCCTTGATGAGATG
GAGAAACAGCAGAGGCAGCAAGTGGAGAAAAACATCTGTG
AAGCCCGTGAGAAGCTGGAAACGGAGATGGACGATGCATA
TCATGAGCATCAAGCGAACATGCTCAGACAGGATCTCCTT
AGACGTCAAGAGGAACTTCGCCGCATGGAGGAGCTGCACA
GTCAGGAGATGCAGAAGCGTAAAGAGATGCAGCTTAGGCA
AGAAGAGGAACGTCGTAGGAGAGAGGAGGAGATGATGCGG
CAGAGGGAAATCGAAGAACAATTGAGGCGCAAACGCGAGG
AATCTTACAGAATGAACAACTTCATGGATAATAGAGACAG
GGAGATGAGAATGAACACAAGTGGAGGCATGGGATTGTCT
GATATGTCATTTGGATCACCAAACCAGAAGTTCTCATTGA
CCGGAATGAGCTTTGATGGACACCAGGGACTAAGTGGATC
AACACAAGGGGGCCTAGCGTCCAACGAAATGGGCTCTCGG
GTGATTGAAGCAGGTTAAGAAGCATCGTGCGATTGAAAAC
ATGGATCTTAAACCGAAGAAGCTGTTCTCTGAACGGTCGA
CTGACTTTCACAGCCCCAGATGTTCAGTGATAGATGTTCC
TGCACAGTGGATAGAAATGTGCAGACATGTTGGAGACTGA
CGCAATCTGGCAGATGGCTCTGGATGCCTCAAATATATCT
ATTTTTATTTAAATAAACTTAAAATTCCTTCTA

Related Transcripts

Transcripts related to sfpq

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sfpq-204	Havana	2273 nt
mRNA	sfpq-201 (1) Ensembl	Havana	2424 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sfpq-202 (1) Ensembl	Havana	688 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sfpq-003 (1) Ensembl	Havana	818 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations