Transcript

lpcat1-204

ID

ZDB-TSCRIPT-090929-3943

Name

lpcat1-204

Previous Names

lpcat1-001

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

lpcat1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000017880 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000017880|OTTDARG00000014942|ZDB-GENE-060503-915 lpcat1|OTTDARP00000015110 lpcat1-001 LG_ BX571830.6 Danio rerio protein_coding KNOWN, 668 bp
CATGGGATGATGGATGTGAGAGAATACGTCATCGCTCTGT
CAGTGGTTTGTAGACCTTTCAGATATCTGGACACCGTTAA
ACTGGCCTTCAGGATGTTTGAAGCACAGGAGGACGGAGCT
ATTGTTGAAGACGAACTGACCGTCATTCTAAAAACTGCTC
TGGGAGTTGGAGATCTTGCTGTTTCTGAACTCTTCAGGGC
CATAGATAGCCAAGACAAGGGAAAGATCACATTTGATGAA
TTGTGCAGCTTCATGGAGAAATGCCCTGATTTGGTGGAGC
AGTATCACTGTCTCTGTGAGTCAATCTCTCAGCACTCCAG
AGAATCCACATCTTCAAGTAACGGCTTCTGTGCTGACTTC
AGCCCCCGAAATCACAGCAAGAAACAGGACTAAACATGGC
TTTACCATCACAGCCTGTCACCCTCAGTGTGTGACGCTGT
TTTCCTGTGTGCACCAAGAGAGGAACTTATCTTCAAGGCG
CTTCGTTTTTCTGACAGATCTTAAGAATGGAAACGAAACT
GACTTTATTTTAATGCCTTATGTTCTTTTTTTGACAGAGA
GATTTTCACAGTTTTTCTATATAAAGCGTTGCTTGCTTTA
AAAGATTGCAATTTTTAATATGCGCAAAATAAATAAATAA
AAAAACCACGCCAACAACATACAAAAAA

Related Transcripts

Transcripts related to lpcat1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lpcat1-204	Havana	668 nt
aberrant processed transcript	lpcat1-205 (1) Ensembl	Havana	820 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	lpcat1-201 (1) Ensembl	Havana	2050 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	lpcat1-202 (1) Ensembl	Havana	798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	lpcat1-206 (1) Ensembl	Ensembl	2027 nt	Select Tool ZFIN BLAST
ncRNA	lpcat1-002 (1) Ensembl	Havana	505 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations