ZFIN ID: ZDB-PUB-151021-8
Transcriptome analysis of Rpl11-deficient zebrafish model of Diamond-Blackfan Anemia
Zhang, Z., Jia, H., Zhang, Q., Wan, Y., Song, B., Jia, Q., Liu, H., Zhu, X., Fang, X.
Date: 2014
Source: Genomics Data 2: 173-5 (Journal)
Registered Authors: Jia, Haibo, Wang, Yang
Keywords: DBA, High-Seq 2000, IPA, Transcriptome, Zebrafish
MeSH Terms: none
PubMed: 26484089 Full text @ Genom. Data
ABSTRACT
To comprehensively reflect the roles of Rpl11 on the transcriptome of zebrafish model of Diamond-Blackfan Anemia (DBA), we performed whole-genome transcriptome sequencing on the Illumina Hi-Seq 2000 sequencing platform. Two different transcriptomes of zebrafish Rpl11-deficient and control Morpholino (Mo) embryos were collected and analyzed. The experimental design and methods, including sample preparation, RNA-Seq data evaluation and treatment, were described in details so that representative high-throughput sequencing data were acquired for assessing the actual impacts of Rpl11 on zebrafish embryos. We provided the accession number GSE51326 for easy access to the database.
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