Gene trapping using gal4 in zebrafish
- Authors
- Balciuniene, J., and Balciunas, D.
- ID
- ZDB-PUB-131113-19
- Date
- 2013
- Source
- Journal of visualized experiments : JoVE (79): e50113 (Journal)
- Registered Authors
- Balciunas, Darius, Balciuniene, Jorune
- Keywords
- none
- MeSH Terms
-
- Animals
- DNA-Binding Proteins/genetics*
- Female
- Genetic Vectors/genetics
- Male
- Mutagenesis, Insertional/methods*
- Trans-Activators/genetics
- Transcription Factors/genetics*
- Zebrafish/genetics*
- Zebrafish Proteins/genetics*
- PubMed
- 24121167 Full text @ J. Vis. Exp.
Large clutch size and external development of optically transparent embryos make zebrafish an exceptional vertebrate model system for in vivo insertional mutagenesis using fluorescent reporters to tag expression of mutated genes. Several laboratories have constructed and tested enhancer- and gene-trap vectors in zebrafish, using fluorescent proteins, Gal4- and lexA- based transcriptional activators as reporters. These vectors had two potential drawbacks: suboptimal stringency (e.g. lack of ability to differentiate between enhancer- and gene-trap events) and low mutagenicity (e.g. integrations into genes rarely produced null alleles). Gene Breaking Transposon (GBTs) were developed to address these drawbacks. We have modified one of the first GBT vectors, GBT-R15, for use with Gal4-VP16 as the primary gene trap reporter and added UAS:eGFP as the secondary reporter for direct detection of gene trap events. Application of Gal4-VP16 as the primary gene trap reporter provides two main advantages. First, it increases sensitivity for genes expressed at low expression levels. Second, it enables researchers to use gene trap lines as Gal4 drivers to direct expression of other transgenes in very specific tissues. This is especially pertinent for genes with non-essential or redundant functions, where gene trap integration may not result in overt phenotypes. The disadvantage of using Gal4-VP16 as the primary gene trap reporter is that genes coding for proteins with N-terminal signal sequences are not amenable to trapping, as the resulting Gal4-VP16 fusion proteins are unlikely to be able to enter the nucleus and activate transcription. Importantly, the use of Gal4-VP16 does not pre-select for nuclear proteins: we recovered gene trap mutations in genes encoding proteins which function in the nucleus, the cytoplasm and the plasma membrane.