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ZFIN ID:
ZDB-PERS-140820-2
Kawashima, Takashi
Email:
kawashimat@janelia.hhmi.org
URL:
Affiliation:
Ahrens Lab
Address:
Country:
United States
Phone:
Fax:
ORCID ID:
BIOGRAPHY AND RESEARCH INTERESTS
PUBLICATIONS
Koh, T.H., Bishop, W.E., Kawashima, T., Jeon, B.B., Srinivasan, R., Mu, Y., Wei, Z., Kuhlman, S.J., Ahrens, M.B., Chase, S.M., Yu, B.M. (2023) Dimensionality reduction of calcium-imaged neuronal population activity. Nature computational science. 3:718571-85
Böhm, U.L., Kimura, Y., Kawashima, T., Ahrens, M.B., Higashijima, S.I., Engert, F., Cohen, A.E. (2022) Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish. Neuron. 110(7):1211-1222.e4
Hamanaka, K., Imagawa, E., Koshimizu, E., Miyatake, S., Tohyama, J., Yamagata, T., Miyauchi, A., Ekhilevitch, N., Nakamura, F., Kawashima, T., Goshima, Y., Mohamed, A.R., Ch'ng, G.S., Fujita, A., Azuma, Y., Yasuda, K., Imamura, S., Nakashima, M., Saitsu, H., Mitsuhashi, S., Mizuguchi, T., Takata, A., Miyake, N., Matsumoto, N. (2020) De Novo Truncating Variants in the Last Exon of SEMA6B Cause Progressive Myoclonic Epilepsy. American journal of human genetics. 106(4):549-558
Abdelfattah, A.S., Kawashima, T., Singh, A., Novak, O., Liu, H., Shuai, Y., Huang, Y.C., Campagnola, L., Seeman, S.C., Yu, J., Zheng, J., Grimm, J.B., Patel, R., Friedrich, J., Mensh, B.D., Paninski, L., Macklin, J.J., Murphy, G.J., Podgorski, K., Lin, B.J., Chen, T.W., Turner, G.C., Liu, Z., Koyama, M., Svoboda, K., Ahrens, M.B., Lavis, L.D., Schreiter, E.R. (2019) Bright and photostable chemigenetic indicators for extended in vivo voltage imaging. Science (New York, N.Y.). 365(6454):699-704
Marvin, J.S., Shimoda, Y., Magloire, V., Leite, M., Kawashima, T., Jensen, T.P., Kolb, I., Knott, E.L., Novak, O., Podgorski, K., Leidenheimer, N.J., Rusakov, D.A., Ahrens, M.B., Kullmann, D.M., Looger, L.L. (2019) A genetically encoded fluorescent sensor for in vivo imaging of GABA. Nature Methods. 16(8):763-770
Piatkevich, K.D., Jung, E.E., Straub, C., Linghu, C., Park, D., Suk, H.J., Hochbaum, D.R., Goodwin, D., Pnevmatikakis, E., Pak, N., Kawashima, T., Yang, C.T., Rhoades, J.L., Shemesh, O., Asano, S., Yoon, Y.G., Freifeld, L., Saulnier, J.L., Riegler, C., Engert, F., Hughes, T., Drobizhev, M., Szabo, B., Ahrens, M.B., Flavell, S.W., Sabatini, B.L., Boyden, E.S. (2018) A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. Nature Chemical Biology. 14(4):352-360
Kawashima, T., Zwart, M.F., Yang, C.T., Mensh, B.D., Ahrens, M.B. (2016) The Serotonergic System Tracks the Outcomes of Actions to Mediate Short-Term Motor Learning. Cell. 167:933-946.e20
Freeman, J., Vladimirov, N., Kawashima, T., Mu, Y., Sofroniew, N.J., Bennett, D.V., Rosen, J., Yang, C.T., Looger, L.L., Ahrens, M.B. (2014) Mapping brain activity at scale with cluster computing. Nature Methods. 11(9):941-50
Vladimirov, N., Mu, Y., Kawashima, T., Bennett, D.V., Yang, C.T., Looger, L.L., Keller, P.J., Freeman, J., Ahrens, M.B. (2014) Light-sheet functional imaging in fictively behaving zebrafish. Nature Methods. 11(9):883-4
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