ZFIN ID: ZDB-LAB-180820-3
Shih-Lei Lai Laboratory
PI/Director: Lai, Shih-Lei (Ben)
Contact Person: Lai, Shih-Lei (Ben)
Email: ben.s.lai@ibms.sinica.edu.tw
URL: http://www.ibms.sinica.edu.tw/benlai/
Address: N610 IBMS, 128 Academia Sinica Road, Sec 2, Taipei
Country: Taiwan
Phone: 886-2-2789-9019
Fax:
Line Designation: as


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 2 genomic features


STATEMENT OF RESEARCH INTERESTS
Heart failure is a major cause of morbidity and mortality, in part because of the inability of the human heart to replenish lost tissue post myocardial infarction (MI).

Unlike adult mice and humans, many vertebrates, including certain fish and amphibians, are capable of endogenous heart regeneration at adult stages. While zebrafish exhibits a remarkable regenerative capacity after various cardiac insults, this ability is not shared by another teleost, the medaka, despite medaka has similar anatomic structure, physiological conditions and living environment. In order to identify the cellular and molecular bases for this difference, we performed comparative analyses in zebrafish and medaka following cardiac cryoinjury. Transcriptomic comparisons point to major differences in immune response and angiogenic neovascularization between these models. Our functional studies indeed highlighted the complex role of the immune response and neovascularization during cardiac regeneration, and serve as a platform for identifying and testing additional regulators of cardiac repair.

Our primary focus is to investigate the differential immune responses in regenerative (e.g. zebrafish and neonatal mice) and non-regenerative models (e.g. medaka and adult mice), and translate the knowledge into potential therapeutics to modulate the immune response and improve cardiac repair in patients suffered from MI.


LAB MEMBERS
Chowdhury, Kaushik Graduate Student Lim, Khai-Lone Graduate Student Wei, Ke-Hsuan (Leise) Graduate Student
Chen, Yu-Siang (Sean) Research Staff Liang, Chih-Hsi (Zina) Research Staff Chu, An-Ju (Annie)


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Wei, K.H., Lin, I.T., Chowdhury, K., Lim, K.L., Liu, K.T., Ko, T.M., Chang, Y.M., Yang, K.C., Lai, S.L. (2023) Comparative single-cell profiling reveals distinct cardiac resident macrophages essential for zebrafish heart regeneration. eLIFE. 12:
Chowdhury, K., Lai, S.L., Marín-Juez, R. (2022) Modulation of VEGFA Signaling During Heart Regeneration in Zebrafish. Methods in molecular biology (Clifton, N.J.). 2475:297-312
Tsedeke, A.T., Allanki, S., Gentile, A., Jimenez-Amilburu, V., Rasouli, S.J., Guenther, S., Lai, S.L., Stainier, D.Y.R., Marín-Juez, R. (2021) Cardiomyocyte heterogeneity during zebrafish development and regeneration. Developmental Biology. 476:259-271
Tsao, K.C., Lin, Y.C., Chen, Y.T., Lai, S.L., Yang, R.B. (2021) Zebrafish scube1 and scube2 cooperate in promoting Vegfa signaling during embryonic vascularization. Cardiovascular research. 118(4):1074-1087
El-Brolosy, M.A., Kontarakis, Z., Rossi, A., Kuenne, C., Günther, S., Fukuda, N., Kikhi, K., Boezio, G.L.M., Takacs, C.M., Lai, S.L., Fukuda, R., Gerri, C., Giraldez, A.J., Stainier, D.Y.R. (2019) Genetic compensation triggered by mutant mRNA degradation. Nature. 568(7751):193-197
Lai, S.L., Marín-Juez, R., Stainier, D.Y.R. (2018) Immune responses in cardiac repair and regeneration: a comparative point of view. Cellular and molecular life sciences : CMLS. 76(7):1365-1380
Burg, L., Palmer, N., Kikhi, K., Miroshnik, E.S., Rueckert, H., Gaddy, E., MacPherson Cunningham, C., Mattonet, K., Lai, S.L., Marín-Juez, R., Waring, R.B., Stainier, D.Y.R., Balciunas, D. (2018) Conditional mutagenesis by oligonucleotide-mediated integration of loxP sites in zebrafish. PLoS Genetics. 14:e1007754
Stainier, D.Y., Lai, S.B., Marín-Juez, R., Moura, P.L., Kuenne, C., Lai, J.K.H., Tsedeke, A.T., Guenther, S., Looso, M. (2017) Reciprocal analyses in zebrafish and medaka reveal that harnessing the immune response promotes cardiac regeneration. eLIFE. 6
Marín-Juez, R., Marass, M., Gauvrit, S., Rossi, A., Lai, S.L., Materna, S.C., Black, B.L., Stainier, D.Y. (2016) Fast revascularization of the injured area is essential to support zebrafish heart regeneration. Proceedings of the National Academy of Sciences of the United States of America. 113(40):11237-11242
Lai, S.L., Yao, W.L., Tsao, K.C., Houben, A.J., Albers, H.M., Ovaa, H., Moolenaar, W.H., and Lee, S.J. (2012) Autotaxin/Lpar3 signaling regulates Kupffer's vesicle formation and left-right asymmetry in zebrafish. Development (Cambridge, England). 139(23):4439-4448
Yeh, C.M., Liu, Y.C., Chang, C.J., Lai, S.L., Hsiao, C.D., and Lee, S.J. (2011) Ptenb Mediates Gastrulation Cell Movements via Cdc42/AKT1 in Zebrafish. PLoS One. 6(4):e18702
Lin, C.W., Yen, S.T., Chang, H.T., Chen, S.J., Lai, S.L., Liu, Y.C., Chan, T.H., Liao, W.L., and Lee, S.J. (2010) Loss of Cofilin 1 Disturbs Actin Dynamics, Adhesion between Enveloping and Deep Cell Layers and Cell Movements during Gastrulation in Zebrafish. PLoS One. 5(12):e15331
Lai, S.L., Chien, A.J., Moon, R.T. (2009) Wnt/Fz signaling and the cytoskeleton: potential roles in tumorigenesis. Cell Research. 19:532-45
Lai, S.L. (2008) The roles of Rho and its associated proteins in cytokinesis and gastrulation cell migration in zebrafish, Danio rerio. Ph.D. Thesis. :148p
Lai, S.L., Chan, T.H., Lin, M.J., Huang, W.P., Lou, S.W., and Lee, S.J. (2008) Diaphanous-related formin 2 and profilin I are required for gastrulation cell movements. PLoS One. 3(10):e3439
Lai, S.L., Chang, C.N., Wang, P.J., and Lee, S.J. (2005) Rho mediates cytokinesis and epiboly via ROCK in zebrafish. Molecular reproduction and development. 71(2):186-196