ZFIN Image: Svara et al., 2022, Fig. 6

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Figure Caption

Fig. 6 Automatic detection of synaptic contacts.

a, Dorsal view of the vEM dataset, vesicle clouds labeled in blue. b, Close-up examples of automatically segmented vesicle clouds (blue) and synaptic clefts (magenta) in thalamus (Th), pretectum (preT), optic tectum (TeO) and ventral hindbrain (vHb). c. Outline of RGC AFs 4 (left) and 7 (right). d, Volume fraction occupied by vesicle clouds, calculated for all AFs as a percentage of total area volume. Visualization adapted from mapzebrain atlas. Scale bars, 50 µm (a), 500 nm (b) and 10 µm (c).

Acknowledgments

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