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ZIRC
ZFIN ID: ZDB-GENE-990910-11
Gene Name: melanocyte inducing transcription factor a
Gene Symbol: mitfa
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: Mitf2 (1), Mitf-related gene, nac, nacre, z3A.1 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in circadian rhythm; melanocyte differentiation; and transcription, DNA-templated. Predicted to localize to  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b692 Point Mutation Unknown Missense
  • Zebrafish International Resource Center (ZIRC) (order this)
  • b1085 Unknown Unknown Unknown
    la025593Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mitfa_unspecified Unspecified Unknown Unknown
    s170 Unknown Unknown Unknown
    s184 Unknown Unknown Unknown
    vc7 Point Mutation Donor Splice Site of Intron 6 Intron Gain of Intron 6
    w2 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • z25 Point Mutation Unknown Missense ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH mitfa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ocular albinism with sensorineural deafness Waardenburg syndrome/ocular albinism, digenic 103470
    Tietz syndrome Tietz albinism-deafness syndrome 103500
    Waardenburg syndrome type 2A Waardenburg syndrome, type 2A 193510
    COMMAD syndrome 617306
    {Melanoma, cutaneous malignant, susceptibility to, 8} 614456
    DISEASE ASSOCIATED WITH mitfa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian rhythm (more)
    Cellular Component nucleoplasm (more)
    Molecular Function DNA-binding transcription factor activity, RNA polymerase II-specific (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mitfa-201 (1) 1652
    mitfa-202 (1) 636
    mitfa-203 (1) 1794
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS
    Addgene
    MARKER RELATIONSHIPS
    mitfa Contained in: [BAC] CH211-170N20 (1) (order this)
    mitfa Encodes: [EST] cegs2213 (1) (order this)
    [cDNA] MGC:65859 (1) (order this), MGC:77339 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_130923 (1) 1595 bp
    Genomic GenBank:BX927362 (1) 131893 bp
    Select Tool
    Polypeptide UniProtKB:Q9PWC2 (1) 412 aa
    Sequence Clusters UniGene:81296 (1)
    Sequence Information (all 25)
    ORTHOLOGY for mitfa ( Chr: 6 )
    CITATIONS (714)