ZFIN ID: ZDB-GENE-990415-76
Gene Name: forkhead box A sequence
Gene Symbol: foxa    Nomenclature History

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Previous Names: fkd4 (1), forkhead-4, zf-FKH2, zgc:100769

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in several structures, including central nervous system; hypochord; margin; notochord; and prechordal plate.
Genome Resources: Alliance (1),  Gene:30539 (1),  Ensembl(GRCz11):ENSDARG00000087094 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-foxa
3
MO1-foxa N/A 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH foxa HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH foxa VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA foxa-201 (1)    Ensembl 1956
foxa-202 (1)    Ensembl 1121
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM foxa No data available
MARKER RELATIONSHIPS
foxa Contained in: [BAC] CH73-22O18 (1), CH73-127I13 (1)
foxa Encodes: [cDNA] MGC:100769 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131282 (1) 1974 nt
Genomic GenBank:FP016207 (1) 126002 nt
Select Tool
Polypeptide UniProtKB:F1QC30 (1) 355 aa
Sequence Information (all 20)
ORTHOLOGY for foxa ( Chr: 14 )
CITATIONS (50)