ZFIN ID: ZDB-GENE-990415-53
Gene Name: empty spiracles homeobox 3
Gene Symbol: emx3
Sequence Ontology ID : SO:0000704

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Previous Names: emx1 (1), zgc:110517

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Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 64 figures from 46 publications
Directly Submitted Expression Data: 6 figures (20 images) from Thisse et al., 2005 [eu682]
Wild-type Stages, Structures: Cleavage:8-cell (1.25h-1.5h) to Adult (90d-730d, breeding adult)
  anterior neural keel, caudal tuberculum, diencephalon, dorsal telencephalon (all 18) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-emx3 (1), MO2-emx3 (1), MO3-emx3 (1), MO4-emx3 (1)
PHENOTYPE
Data: 4 figures from 2 publications
Observed in: anterior commissure, apoptotic process, axon extension, axonal fasciculation (all 11) expand
DISEASE ASSOCIATED WITH emx3 HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process central nervous system projection neuron axonogenesis (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA emx3-001 (1) 2987
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM emx3
    Tg(emx3:emx3-MYC-GFP), Tg(emx3:YFP), Tg(emx3:YFPm), Tg(hsp70l:emx3-MYC-GFP)
    MARKER RELATIONSHIPS
    emx3Contained in: [BAC] CH73-263G20 (1) (order this), DKEYP-110E4 (1)
    emx3Encodes: [EST] eu682 (1)
    [cDNA] MGC:110517 (1) (order this), MGC:193008 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131279 (1) 1144bp
    Genomic GenBank:BX323077 (1) 195732bp
    Select Tool
    Polypeptide UniProtKB:B2GTJ9 (1) 233aa
    Sequence Clusters UniGene:150252 (1)
    Sequence Information (all 24)
    OTHER emx3 GENE PAGES
  • Alliance (1)
  • Gene:30536 (1)
  • VEGA:OTTDARG00000016645 (1)
  • Ensembl(GRCz10):ENSDARG00000020417 (1)
  • ORTHOLOGY for emx3 (Chr: 14)
    CITATIONS (90)