ZFIN ID: ZDB-GENE-990415-46
Gene Name: nucleoporin 93
Gene Symbol: nup93    Nomenclature History

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Previous Names: dead eye (1), dye (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to be a structural constituent of nuclear pore. Predicted to be involved in nuclear pore complex assembly; poly(A)+ mRNA export from nucleus; and protein import into nucleus. Predicted to localize to nuclear membrane; nuclear periphery; and nuclear pore. Human ortholog(s) of this gene implicated in nephrotic syndrome type 12. Orthologous to human NUP93 (nucleoporin 93).
Genome Resources: Alliance (1),  Gene:30172 (1),  Ensembl(GRCz11):ENSDARG00000003487 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55737]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi4Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hi780Tg Transgenic Insertion Intron 1 Unknown DNA
    hi821bTg Transgenic Insertion Intron 1 Unknown DNA
    hi1515Tg Transgenic Insertion Intron 2 Unknown DNA
    hi2269Tg Transgenic Insertion Intron 1 Unknown DNA
    hi2400Tg Transgenic Insertion Intron 1 Unknown DNA
    hi2587Tg Transgenic Insertion Intron 1 Unknown DNA
    la013208Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027913Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23272 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36620 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa43076 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH nup93 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    nephrotic syndrome type 12 Alliance Nephrotic syndrome, type 12 616892
    DISEASE ASSOCIATED WITH nup93 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nuclear pore complex assembly (more)
    Cellular Component nuclear membrane (more)
    Molecular Function structural constituent of nuclear pore (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nup93-201 (1)    Ensembl 3145
    nup93-203 (1)    Ensembl 511
    ncRNA nup93-003 (1)    Ensembl 855
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nup93 No data available
    MARKER RELATIONSHIPS
    nup93 Contained in: [BAC] CH211-122C9 (1), DKEY-102F14 (1) (order this)
    nup93 Encodes: [cDNA] MGC:55737 (1), MGC:193035 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_130981 (1) 2680 nt
    Genomic GenBank:BX908765 (1) 155120 nt
    Select Tool
    Polypeptide UniProtKB:B2GRL6 (1) 820 aa
    Sequence Information (all 27)
    ORTHOLOGY for nup93 ( Chr: 18 )
    CITATIONS (38)