ZFIN ID: ZDB-GENE-990415-267
Gene Name: forkhead box G1a
Gene Symbol: foxg1a
Sequence Ontology ID : SO:0000704

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Previous Names: BF-1, bf1, foxg1, brain factor 1, zgc:109850

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 41 figures from 26 publications
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Adult (90d-730d, breeding adult)
  anterior neural keel, brain, immature eye, neuroectoderm anterior region (all 24) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15987 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23103 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-foxg1a (1), MO2-foxg1a (1)
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in: cell proliferation in forebrain, ciliated olfactory receptor neuron, embryonic retina morphogenesis in camera-type eye, epithelial cell proliferation (all 8) expand
    DISEASE ASSOCIATED WITH foxg1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Rett syndrome Rett syndrome, congenital variant 613454
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic retina morphogenesis in camera-type eye (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001766 (1)
  • InterPro:IPR018122 (1)
  • InterPro:IPR030456 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00657 (1)
  • PROSITE:PS00658 (1)
  • PROSITE:PS50039 (1)
  • Pfam:PF00250 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxg1a-001 (1) 2336
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxg1a No data available
    MARKER RELATIONSHIPS
    foxg1aContained in: [BAC] DKEY-28G23 (order this)
    foxg1aEncodes: [cDNA] MGC:109850 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131067 (1) 2348bp
    Genomic GenBank:BX511189 (1) 223248bp Blast at MegaBLAST
    Polypeptide UniProtKB:O73862 (1) 420aa
    Sequence Clusters UniGene:75832 (1)
    Sequence Information (all 14)
    OTHER foxg1a GENE PAGES
  • Alliance (1)
  • Gene:30274 (1)
  • VEGA:OTTDARG00000028809 (1)
  • Ensembl(GRCz10):ENSDARG00000070769 (1)
  • ORTHOLOGY for foxg1a (Chr: 17)
    CITATIONS (58)