ZFIN ID: ZDB-GENE-990415-260
Gene Name: transporter associated with antigen processing, subunit type c
Gene Symbol: tap2c
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: tap2 (1), abcb3, si:dz179b20.3

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from Gonzalez et al., 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  brain, liver, musculature system
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tap2c HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
MHC class I deficiency Bare lymphocyte syndrome, type I, due to TAP2 deficiency 604571
Wegener-like granulomatosis
GENE ONTOLOGY
Ontology GO Term
Biological Process response to methylmercury (more)
Cellular Component integral component of membrane (more)
Molecular Function ATP binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003439 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR011527 (1)
  • InterPro:IPR017871 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00211 (1)
  • PROSITE:PS50893 (1)
  • PROSITE:PS50929 (1)
  • Pfam:PF00005 (1)
  • Pfam:PF00664 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abcb3-001 (1) 2103
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tap2c No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tap2cContained in: [PAC] BUSM1-179B20 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:AF032394 (1) 439bp
    Genomic GenBank:AL672151 (1) 102077bp
    Select Tool
    Polypeptide UniProtKB:Q8AVZ9 (1) 700aa
    Sequence Clusters UniGene:88570 (1)
    Sequence Information (all 7)
    OTHER tap2c GENE PAGES
  • Gene:30695 (1)
  • VEGA:OTTDARG00000001710 (1)
  • ORTHOLOGY for tap2c (Chr: 19)
    CITATIONS (16)