ZFIN ID: ZDB-GENE-990415-260
Gene Name: ATP-binding cassette, sub-family B (MDR/TAP), member 3
Gene Symbol: abcb3
Previous Names: si:dz179b20.3, tap2 (1)
Location: Chr: 19   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from Gonzalez et al., 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  brain, liver, musculature system
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Bare lymphocyte syndrome, type I, due to TAP2 deficiency 604571
Wegener-like granulomatosis
GENE ONTOLOGY
Ontology GO Term
Biological Process response to methylmercury (more)
Cellular Component integral component of membrane (more)
Molecular Function ATP binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001140 (1)
  • InterPro:IPR003439 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR011527 (1)
  • InterPro:IPR017871 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00211 (1)
  • PROSITE:PS50893 (1)
  • PROSITE:PS50929 (1)
  • Pfam:PF00005 (1)
  • Pfam:PF00664 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abcb3-001 (1) 2103
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM abcb3 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    abcb3 Contained in: [PAC] BUSM1-179B20 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:AF032394 (1) 439 bp
    Genomic GenBank:AL672151 (1) 102077 bp
    Select Tool
    Polypeptide UniProtKB:Q8AVZ9 (1) 700 aa
    Sequence Clusters UniGene:88570 (1)
    Sequence Information (all 7)
    OTHER abcb3 GENE PAGES
  • Gene:30695 (1)
  • VEGA:OTTDARG00000001710 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish abcb3 19  
    Human TAP2 6 (6p21.3)
  • OMIM:170261
  • Gene:6891
  • Orthology Details
    CITATIONS (14)