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ZIRC
ZFIN ID: ZDB-GENE-990415-238
Gene Name: retinal homeobox gene 3
Gene Symbol: rx3
Sequence Ontology ID : SO:0001217

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Previous Names: chk, chokh, eyes missing (1), eym (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity. Involved in animal organ development and cell fate specification. Predicted to localize to the nucleus. Human ortholog(s) of this gene  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu499 Point Mutation Unknown Missense ENU
ne2611 Point Mutation Exon 2 Missense ENU
rx3_unspecified Unspecified Unknown Unknown
s399 Point Mutation Unknown Premature Stop ENU
sa29528 Point Mutation Unknown Splice Site ENU
t25181 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • t25327 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • w29 Point Mutation Exon 2 Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH rx3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    isolated microphthalmia 3 Microphthalmia, isolated 3 611038
    DISEASE ASSOCIATED WITH rx3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process adenohypophysis development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 15)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rx3-201 (1) 1411
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rx3
    MARKER RELATIONSHIPS
    rx3 Contained in: [BAC] CH211-233A1 (1) (order this)
    rx3 Encodes: [cDNA] MGC:195183 (1), MGC:195186 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131227 (1) 1322 bp
    Genomic GenBank:BX248399 (1) 158884 bp
    Select Tool
    Polypeptide UniProtKB:A8E7H4 (1) 292 aa
    Sequence Clusters UniGene:540 (1)
    Sequence Information (all 17)
    ORTHOLOGY for rx3 ( Chr: 21 )
    CITATIONS (113)