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General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-207
Gene Name: peripherin
Gene Symbol: prph
Sequence Ontology ID : SO:0001217

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Previous Names: plasticin, zgc:111926

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity. Involved in tissue regeneration. Predicted to localize to the type III intermediate filament. Human ortholog(s) of this gene implicated in amyotrophic  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Blastula:30%-epiboly (4.66h-5.25h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017851Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH prph HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
amyotrophic lateral sclerosis type 1 {Amyotrophic lateral sclerosis, susceptibility to} 105400
DISEASE ASSOCIATED WITH prph VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process tissue regeneration (more)
Cellular Component intermediate filament (more)
Molecular Function structural molecule activity (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA prph-002 (1) 2338
prph-202 (1) 2080
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM prph No data available
MARKER RELATIONSHIPS
prph Contained in: [Fosmid] CH1073-211D19 (1) (order this), ZFOS-221A11 (1)
prph Encodes: [EST] af024598
[cDNA] MGC:111926 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131054 (1) 2760 bp
Genomic GenBank:CU633810 (1) 37675 bp
Select Tool
Polypeptide UniProtKB:P87359 (1) 442 aa
Sequence Clusters UniGene:263 (1)
Sequence Information (all 26)
ORTHOLOGY for prph ( Chr: 11 )
CITATIONS (35)