ZFIN ID: ZDB-GENE-990415-140
Gene Name: proteasome 20S subunit beta 9a
Gene Symbol: psmb9a    Nomenclature History

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Previous Names: lmp2, psmb9, beta1ia (1), wu:fa66f04, wu:fj22d05, zgc:91842

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to cytoplasm; nucleus; and proteasome core complex. Human ortholog(s) of this gene implicated in ankylosing spondylitis; autoimmune hypersensitivity disease (multiple); lymphoma; psoriasis; and renal cell carcinoma. Orthologous to human PSMB9 (proteasome 20S subunit beta 9).
Genome Resources: Alliance (1),  Gene:30665 (1),  Ensembl(GRCz11):ENSDARG00000000656 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91842]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH psmb9a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Proteasome-associated autoinflammatory syndrome 3, digenic 617591
DISEASE ASSOCIATED WITH psmb9a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process immune system process (more)
Cellular Component cytoplasm (more)
Molecular Function endopeptidase activity (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA psmb9a-001 (1) 883
psmb9a-201 (1)    Ensembl 1153
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM psmb9a No data available
MARKER RELATIONSHIPS
psmb9a Contained in: [BAC] CH73-386O6 (1), CH211-51F10 (1)
[PAC] BUSM1-262K18 (1)
psmb9a Encodes: [EST] fa66f04, fj22d05
[cDNA] MGC:91842 (1), MGC:193004 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131391 (1) 1130 nt
Genomic GenBank:BX510994 186973 nt
Select Tool
Polypeptide UniProtKB:B2GTJ5 (1) 218 aa
Sequence Information (all 24)
ORTHOLOGY for psmb9a ( Chr: 19 )
CITATIONS (44)