ZFIN ID: ZDB-GENE-990415-118
Gene Name: homeobox D12a
Gene Symbol: hoxd12a
Sequence Ontology ID : SO:0000704

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Previous Names: hoxd-12, hoxd12

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity; predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated; predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 17 figures from 10 publications
Directly Submitted Expression Data: 5 figures (6 images) from Thisse et al., 2004 [IMAGE:6901952]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb186 Insertion Unknown Unknown CRISPR
ihb187 Indel Unknown Unknown CRISPR
sa21419 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxd12a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxd12a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxd12a-202 (1) 1396
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxd12a No data available
    MARKER RELATIONSHIPS
    hoxd12aContained in: [BAC] RP71-78H1 (1) (order this)
    hoxd12aEncodes: [EST] IMAGE:6901952 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001126486 (1) 1309bp
    Genomic GenBank:BX322661 (1) 146527bp
    Select Tool
    Polypeptide UniProtKB:B0S5Y9 (1) 277aa
    Sequence Clusters UniGene:151901 (1)
    Sequence Information (all 19)
    OTHER hoxd12a GENE PAGES
  • Alliance (1)
  • Gene:100006598 (1)
  • VEGA:OTTDARG00000017441 (1)
  • Ensembl(GRCz11):ENSDARG00000059263 (1)
  • ORTHOLOGY for hoxd12a (Chr: 9)
    CITATIONS (39)