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ZIRC
ZFIN ID: ZDB-GENE-990415-108
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Gene Name: homeobox B8a
Gene Symbol: hoxb8a
Sequence Ontology ID : SO:0001217

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Previous Names: gp-8, hoxb8, fj67g02, wu:fj67g02 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in cell population proliferation and posterior lateral line neuromast primordium  ...
GENE EXPRESSION
All Expression Data: 12 figures from 6 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [MGC:64159]
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14443 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Breau et al., 2013
    Observed in:
    DISEASE ASSOCIATED WITH hoxb8a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxb8a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell population proliferation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000047 (1)
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb8a-201 (1) 1817
    Select Tool
    ottdart00000001809 (1) 1752
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxb8a
    MARKER RELATIONSHIPS
    hoxb8a Contained in: [BAC] CH211-72A16 (1) (order this)
    [PAC] BUSM1-254O17 (1) (order this)
    hoxb8a Encodes: [EST] fj67g02
    [cDNA] MGC:64159 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131120 (1) 1821 bp
    Select Tool
    Genomic GenBank:BX927395 (1) 152987 bp
    Select Tool
    Polypeptide UniProtKB:Q8AWZ0 (1) 245 aa
    Select Tool
    Sequence Clusters UniGene:75787 (1)
    Sequence Information (all 19)
    OTHER hoxb8a GENE PAGES
  • Alliance (1)
  • Gene:30343 (1)
  • VEGA:OTTDARG00000001695 (1)
  • VEGA:OTTDARG00000019824 (1)
  • Ensembl(GRCz11):ENSDARG00000056027 (2)
    • ORTHOLOGY for hoxb8a ( Chr: 3 )
    CITATIONS (49)