ZFIN ID: ZDB-GENE-990415-105
Gene Name: homeobox B4a
Gene Symbol: hoxb4a
Sequence Ontology ID : SO:0000704

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Previous Names: hoxb4, etID309956.3 (1), sb:eu512, Z-17, ZF-13, zf13

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription activator activity, RNA polymerase II-specific, RNA polymerase II regulatory region sequence-specific DNA binding activity, and activating  ...
GENE EXPRESSION
All Expression Data: 42 figures from 28 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2005 [eu512]
Wild-type Stages, Structures: Gastrula:90%-epiboly (9.0h-10.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015135Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa997 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxb4a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxb4a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR017995 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb4a-001 (1) 1235
    hoxb4a-002 (1) 529
    ottdart00000001816 (1) 1333
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxb4a
    MARKER RELATIONSHIPS
    hoxb4aContained in: [BAC] CH211-72A16 (1) (order this)
    [PAC] BUSM1-254O17 (2) (order this)
    hoxb4aEncodes: [EST] eu512 (1)
    [cDNA] MGC:194195 (1) (order this), MGC:194206 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131118 (1) 741bp
    Genomic GenBank:BX927395 (1) 152987bp
    Select Tool
    Polypeptide UniProtKB:B3DHP6 (1) 246aa
    Sequence Clusters UniGene:133609 (1)
    Sequence Information (all 29)
    OTHER hoxb4a GENE PAGES
  • Alliance (1)
  • Gene:30340 (1)
  • VEGA:OTTDARG00000001702 (1)
  • VEGA:OTTDARG00000019821 (1)
  • Ensembl(GRCz11):ENSDARG00000013533 (2)
  • ORTHOLOGY for hoxb4a (Chr: 3)
    CITATIONS (91)