ZFIN ID: ZDB-GENE-990415-103
Gene Name: homeobox B2a
Gene Symbol: hoxb2a
Sequence Ontology ID : SO:0000704

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Previous Names: hoxb2, hm:zehn0229 (1), Z-151, zehn0229

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Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 23 figures from 14 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2004 [MGC:76824]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  cranial neural crest cell, heart, hindbrain, hindbrain neural keel posterior region (all 27) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14119 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33161 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-hoxb2a (2)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxb2a HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb2a-001 (1) 1832
    ottdart00000001812 (1) 1823
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxb2a No data available
    MARKER RELATIONSHIPS
    hoxb2aContained in: [BAC] DKEY-178D9 (1) (order this)
    [PAC] BUSM1-254O17 (2) (order this)
    hoxb2aEncodes: [EST] zehn0229
    [cDNA] MGC:76824 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131116 (1) 1844bp
    Genomic GenBank:AL645782 (1) 119385bp
    Select Tool
    Polypeptide UniProtKB:F1QMG2 (1) 409aa
    Sequence Clusters UniGene:78066 (1)
    Sequence Information (all 19)
    OTHER hoxb2a GENE PAGES
  • Alliance (1)
  • Gene:30338 (1)
  • VEGA:OTTDARG00000001698 (1)
  • VEGA:OTTDARG00000019761 (1)
  • Ensembl(GRCz10):ENSDARG00000000175 (1)
  • ORTHOLOGY for hoxb2a (Chr: 3)
    CITATIONS (64)