ZFIN ID: ZDB-GENE-980526-514
Gene Name: snail family zinc finger 1b
Gene Symbol: snai1b
Sequence Ontology ID : SO:0000704

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Previous Names: sna2, snail-2 (1), snail1b (1), snail2

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
Note: This gene was originally named snail2 (Thisse et al. 1993). In 2004 Manzanares et al. demonstrated that this gene arose from a duplication event in the teleost lineage that resulted in snail1a and snail1b resulting in a gene name change.
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and DNA-binding activity transcription factor activity; involved in several processes, including ameboidal-type cell migration, cardiac muscle progenitor cell  ...
GENE EXPRESSION
All Expression Data: 71 figures from 54 publications
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12537 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12547 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19312 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    PHENOTYPE
    Data: 10 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH snai1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snai1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cardiac muscle progenitor cell migration to the midline involved in heart field formation (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM snai1b
    MARKER RELATIONSHIPS
    snai1bEncodes: [cDNA] MGC:193979 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_130989 (1) 915bp
    Genomic GenBank:LO017827 (1)
    Polypeptide UniProtKB:Q90414 (1) 257aa
    Sequence Clusters UniGene:625 (1)
    Sequence Information (all 15)
    OTHER snai1b GENE PAGES
  • Alliance (1)
  • Gene:792194 (1)
  • Ensembl(GRCz11):ENSDARG00000046019 (1)
  • ORTHOLOGY for snai1b (Chr: 23)
    CITATIONS (116)