ZFIN ID: ZDB-GENE-980526-150
Gene Name: DEAD-box helicase 3 X-linked b
Gene Symbol: ddx3xb    Nomenclature History

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Previous Names: ddx3b, etID309900.24 (1), p110a, pl10, pl10a, wu:fb43h11, wu:fy72b06

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have RNA binding activity and RNA helicase activity. Involved in brain development. Predicted to localize to P granule and nucleus. Human ortholog(s) of this gene implicated in syndromic X-linked intellectual disability. Orthologous to human DDX3X (DEAD-box helicase 3 X-linked).
Genome Resources: Alliance (1),  Gene:30116 (1),  Ensembl(GRCz11):ENSDARG00000005774 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-ddx3xb N/A 2
DISEASE ASSOCIATED WITH ddx3xb HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Intellectual developmental disorder, X-linked, syndrome, Snijders Blok type 300958
DISEASE ASSOCIATED WITH ddx3xb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process brain development (more)
Cellular Component nucleus (more)
Molecular Function ATP binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ddx3xb-201 (1)    Ensembl 4367
ddx3xb-203 (1)    Ensembl 886
ddx3xb-204 (1)    Ensembl 1070
ncRNA ddx3b-004 (1)    Ensembl 640
ddx3b-005 (1)    Ensembl 949
ddx3b-006 (1)    Ensembl 632
ddx3b-007 (1)    Ensembl 788
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ddx3xb No data available
MARKER RELATIONSHIPS
ddx3xb Contained in: [Fosmid] CH1073-202I10 (1), CH1073-441H10 (1)
ddx3xb Encodes: [EST] fb43h11, fy72b06
[cDNA] MGC:65735 (1)
ddx3xb Has Artifact: [cDNA] MGC:101521
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_130941 (1) 4430 nt
Genomic GenBank:CU855795 (1) 37498 nt
Select Tool
Polypeptide UniProtKB:F1RCB2 (1) 688 aa
Sequence Information (all 28)
ORTHOLOGY for ddx3xb ( Chr: 6 )
CITATIONS (32)