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ZIRC
ZFIN ID: ZDB-GENE-160728-52
Gene Name: si:dkey-23i12.7
Gene Symbol: si:dkey-23i12.7    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Orthologous to human BATF2 (basic leucine zipper ATF-like transcription factor 2).
Genome Resources: Alliance (1),  Gene:100007087 (1),  Ensembl(GRCz11):ENSDARG00000105562 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-23i12.7 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-23i12.7 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000837 (1)
  • InterPro:IPR004827 (1)
  • PROSITE:PS00036 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:dkey-23i12.7-201 (1)    Ensembl 1792
    si:dkey-23i12.7-202 (1)    Ensembl 1771
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-23i12.7 No data available
    MARKER RELATIONSHIPS
    si:dkey-23i12.7 Contained in: [BAC] DKEY-23I12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001342036 (1)
    Genomic GenBank:AL954715 (1) 195884 bp
    Select Tool
    Polypeptide UniProtKB:A0A1D5NSP6 (1) 158 aa
    Sequence Clusters UniGene:154531 (1)
    Sequence Information (all 11)
    ORTHOLOGY for si:dkey-23i12.7 ( Chr: 7 )
    CITATIONS (8)