ZFIN ID: ZDB-GENE-141216-265
Gene Name: si:ch211-212k18.4
Gene Symbol: si:ch211-212k18.4    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have nucleic acid binding activity and zinc ion binding activity. Predicted to localize to the nucleus. Orthologous to human ZNF638 (zinc finger protein 638).
Genome Resources: Alliance (1),  Gene:563749 (1),  Ensembl(GRCz11):ENSDARG00000104169 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-212k18.4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-212k18.4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of translation (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR000690 Matrin/U1-C, C2H2-type zinc finger
Domain IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:ch211-212k18.4-201 (1)    Ensembl 7105
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:ch211-212k18.4 No data available
MARKER RELATIONSHIPS
si:ch211-212k18.4 Contained in: [BAC] CH211-212K18 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009303097 (1)
Genomic GenBank:CR352328 (1) 208530 bp Blast at MegaBLAST
Polypeptide UniProtKB:A0A0R4IZ89 (1) 2195 aa
Sequence Information (all 17)
ORTHOLOGY for si:ch211-212k18.4 ( Chr: 7 )
CITATIONS (12)