ZFIN ID: ZDB-GENE-130531-15
Gene Name: myosin 1D
Gene Symbol: myo1d    Nomenclature History

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Previous Name: si:ch211-94l19.4 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have actin filament binding activity; actin-dependent ATPase activity; and microfilament motor activity. Involved in Kupffer's vesicle development. Predicted to localize to several cellular components, including actin cytoskeleton; microvillus; and vesicle. Is expressed in notochord and tail bud. Orthologous to human MYO1D (myosin ID).
Genome Resources: Alliance (1),  Gene:559562 (1),  Ensembl(GRCz11):ENSDARG00000036863 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Segmentation:20-25 somites (19.0h-22.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
nce16b Small Deletion Unknown Frameshift, Premature Stop CRISPR
nce16c Insertion Unknown Frameshift, Premature Stop CRISPR
pt31a Small Deletion Unknown Frameshift TALEN
pt31b Indel Unknown Frameshift TALEN
pt31c Indel Unknown Frameshift TALEN
sa24915 Point Mutation Unknown Splice Site ENU
sa35308 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35309 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38899 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42047 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45464 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-myo1d 1
    MO1-myo1d N/A 1
    MO2-myo1d N/A 1
    TALEN1-myo1d 1
    DISEASE ASSOCIATED WITH myo1d HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH myo1d VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process Kupffer's vesicle development (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA myo1d-201 (1)    Ensembl 6701
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM myo1d No data available
    MARKER RELATIONSHIPS
    myo1d Contained in: [BAC] CH73-180N10 (1), CH73-385F14 (1), CH211-94L19 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_682916 (1) 6679 nt
    Genomic GenBank:CT033800 (1) 113782 nt
    Select Tool
    Polypeptide RefSeq:XP_688008 (1) 1004 aa
    Sequence Information (all 9)
    ORTHOLOGY for myo1d ( Chr: 12 )
    CITATIONS (12)