Gene

tnca

ID
ZDB-GENE-130530-849
Name
tenascin Ca
Symbol
tnca Nomenclature History
Previous Names
  • zmp:0000000846
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to be involved in neuron projection development and regulation of cell adhesion. Predicted to be located in extracellular region. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in allergic conjunctivitis; asthma; autosomal dominant nonsyndromic deafness 56; and pulmonary hypertension. Orthologous to human TNC (tenascin C).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tnca Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal dominant nonsyndromic deafness 56 Alliance Deafness, autosomal dominant 56 615629
1 - 1 of 1
Associated With tnca Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000742 EGF-like domain
Domain IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Domain IPR003961 Fibronectin type III
Domain IPR041161 Tenascin, EGF-like domain
Family IPR050991 Extracellular Matrix Regulatory Proteins
1 - 5 of 9 Show all
Domain Details Per Protein
Protein Additional Resources Length EGF-like domain Extracellular Matrix Regulatory Proteins Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 Fibrinogen-like, C-terminal Fibronectin type III Fibronectin type III superfamily Immunoglobulin-like fold Tenascin, EGF-like domain
UniProtKB:E7EZJ2 InterPro 1585
UniProtKB:A0A8M9PY97 InterPro 2079
UniProtKB:A0A8M9PKQ8 InterPro 2336
UniProtKB:A0A8M9QEF6 InterPro 1881
UniProtKB:A0A8M3AS32 InterPro 1715
1 - 5 of 9 Show all
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tnca-201 (1)
Ensembl
Ensembl 5,025 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations
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