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General Information
ZIRC
ZFIN ID: ZDB-GENE-130530-668
Gene Name: si:ch211-287a12.9
Gene Symbol: si:ch211-287a12.9
Sequence Ontology ID : SO:0001217

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Previous Names: hepassocin (1), HPS (1), zmp:0000000665 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in liver development. Is expressed in liver.

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
All Expression Data: Fig. 1 from Gao et al., 2015
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9778 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa27608 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 3 figures from Gao et al., 2015
    Observed in:
    DISEASE ASSOCIATED WITH si:ch211-287a12.9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-287a12.9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process liver development (more)
    GO Terms (all 1)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:ch211-287a12.9-201 (1) 1335
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-287a12.9 No data available
    MARKER RELATIONSHIPS
    si:ch211-287a12.9 Contained in: [BAC] CH211-287A12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_017358047 (1)
    Genomic GenBank:AL928852 (1) 157466 bp
    Select Tool
    Polypeptide UniProtKB:Q1RLR4 (1) 345 aa
    Sequence Clusters UniGene:94122 (1)
    Sequence Information (all 15)
    OTHER si:ch211-287a12.9 GENE PAGES
  • Alliance (1)
  • Gene:563523 (1)
  • VEGA:OTTDARG00000031051 (1)
  • Ensembl(GRCz11):ENSDARG00000057004 (2)
  • ORTHOLOGY for si:ch211-287a12.9 ( Chr: 10 )
    CITATIONS (11)