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Gene

hdac5

ID
ZDB-GENE-121219-3
Name
histone deacetylase 5
Symbol
hdac5 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable NAD-dependent histone deacetylase activity (H3-K14 specific) and metal ion binding activity. Acts upstream of or within pronephros morphogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be part of histone deacetylase complex. Orthologous to human HDAC5 (histone deacetylase 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Rothschild et al., 2018
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Rothschild et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hdac5 Human Ortholog
No data available
Associated With hdac5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR023801 Histone deacetylase domain
Domain IPR024643 Histone deacetylase, glutamine rich N-terminal domain
Family IPR000286 Histone deacetylase family
Family IPR017320 Histone deacetylase class II, eukaryotic
Family IPR030703 Histone deacetylase 5
Homologous_superfamily IPR023696 Ureohydrolase domain superfamily
Homologous_superfamily IPR037138 Histone deacetylase domain superfamily
Domain Details Per Protein
Protein Length Histone deacetylase 5 Histone deacetylase class II, eukaryotic Histone deacetylase domain Histone deacetylase domain superfamily Histone deacetylase family Histone deacetylase, glutamine rich N-terminal domain Ureohydrolase domain superfamily
UniProtKB:X1WED5 1076
UniProtKB:E7FH14 1128
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations