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General Information
ZIRC
ZFIN ID: ZDB-GENE-121214-308
Gene Name: si:dkey-202b17.4
Gene Symbol: si:dkey-202b17.4
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human FBXO48 (F-box protein 48).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko1005a Small Deletion Unknown Unknown CRISPR
zko1005b Small Deletion Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-202b17.4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-202b17.4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (more)
Cellular Component cytoplasm (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001810 (1)
  • InterPro:IPR036047 (1)
  • PROSITE:PS50181 (1)
  • Pfam:PF12937 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fbxo48-201 (1) 695
    fbxo48-202 (1) 837
    fbxo48-203 (1) 854
    fbxo48-204 (1) 803
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-202b17.4 No data available
    MARKER RELATIONSHIPS
    si:dkey-202b17.4Contained in: [BAC] DKEY-202B17 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001328021 (1)
    Genomic GenBank:CU929104 (1) 115662bp
    Select Tool
    Polypeptide UniProtKB:R4GEA9 (1) 154aa
    Sequence Clusters UniGene:87444 (1)
    Sequence Information (all 19)
    ORTHOLOGY for si:dkey-202b17.4 (Chr: 1)
    CITATIONS (8)