ZFIN ID: ZDB-GENE-121105-11
Gene Name: sorting nexin 25
Gene Symbol: snx25    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Predicted to be involved in negative regulation of transforming growth factor beta receptor signaling pathway. Predicted to localize to integral component of membrane. Is expressed in brain and liver. Orthologous to human SNX25 (sorting nexin 25).
Genome Resources: Alliance (1),  Gene:793657 (1),  Ensembl(GRCz11):ENSDARG00000099545 (1)
GENE EXPRESSION
All Expression Data: Fig. 1 from Xu et al., 2012
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35626 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snx25 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snx25 VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snx25-201 (1)    Ensembl 3989
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snx25 No data available
    MARKER RELATIONSHIPS
    snx25 Contained in: [BAC] CH73-151L10 (1), CH73-176I12, CH73-348D8 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001163293 (1) 3260 nt
    Genomic GenBank:FP102805 (1) 109250 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IX26 (1) 961 aa
    Sequence Information (all 14)
    ORTHOLOGY for snx25 ( Chr: 14 )
    CITATIONS (12)