ZFIN ID: ZDB-GENE-120628-1
Gene Name: bassoon (presynaptic cytomatrix protein) b
Gene Symbol: bsnb    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zmp:0000001201

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Predicted to be involved in synapse assembly. Predicted to localize to presynaptic active zone. Is expressed in brain and forebrain.
Genome Resources: Alliance (1),  Gene:101175706 (1),  Ensembl(GRCz11):ENSDARG00000079161 (2)
GENE EXPRESSION
All Expression Data: Fig. S4 from Nonet, 2012
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6219 Point Mutation Unknown Premature Stop ENU
sa7352 Point Mutation Unknown Missense ENU
sa16951 Point Mutation Unknown Premature Stop ENU
sa21960 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21962 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41893 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41894 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41895 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41896 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41897 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH bsnb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH bsnb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process synapse assembly (more)
    Cellular Component presynaptic active zone (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA bsnb-201 (1)    Ensembl 11090
    bsnb-203 (1)    Ensembl 619
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM bsnb No data available
    MARKER RELATIONSHIPS
    bsnb Contained in: [BAC] CH73-295N8 (1), DKEY-61O18 (1) (order this)
    [Fosmid] CH1073-21L24 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005155903 (1)
    Genomic GenBank:CR847984 (1) 78361 nt
    Select Tool
    Polypeptide UniProtKB:F1Q6T0 (1) 3380 aa
    Sequence Information (all 30)
    ORTHOLOGY for bsnb ( Chr: 11 )
    CITATIONS (14)