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General Information
ZIRC
ZFIN ID: ZDB-GENE-120328-2
Gene Name: small nuclear RNA activating complex, polypeptide 2
Gene Symbol: snapc2
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in intrahepatic bile duct development; orthologous to human SNAPC2 (small nuclear RNA activating complex polypeptide 2).
GENE EXPRESSION
All Expression Data: Fig. 6 from Schaub et al., 2012
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17021 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20940 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34067 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH snapc2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snapc2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intrahepatic bile duct development (more)
    Cellular Component nuclear body (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021281 (1)
  • Pfam:PF11035 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA snapc2-201 (1) 1833
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM snapc2 No data available
    MARKER RELATIONSHIPS
    snapc2Contained in: [BAC] CH211-196F2 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001923692 (1) 1884bp
    Genomic GenBank:BX470232 (1) 194721bp
    Select Tool
    Polypeptide UniProtKB:E7F685 (1) 413aa
    Sequence Clusters UniGene:112750 (1)
    Sequence Information (all 8)
    ORTHOLOGY for snapc2 (Chr: 7)
    CITATIONS (15)