Gene

arhgap42b

ID

ZDB-GENE-120217-5

Name

Rho GTPase activating protein 42b

Symbol

arhgap42b Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

null

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arhgap42b Human Ortholog

No data available

Associated With arhgap42b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000198	Rho GTPase-activating protein domain
Domain	IPR001452	SH3 domain
Domain	IPR001849	Pleckstrin homology domain
Domain	IPR004148	BAR domain
Domain	IPR047225	GRAF, PH domain
Family	IPR047234	GRAF family
Homologous_superfamily	IPR008936	Rho GTPase activation protein
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR027267	AH/BAR domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length	AH/BAR domain superfamily	BAR domain	GRAF family	GRAF, PH domain	PH-like domain superfamily	Pleckstrin homology domain	Rho GTPase-activating protein domain	Rho GTPase activation protein	SH3 domain	SH3-like domain superfamily
UniProtKB:A0A8M6YTR2	InterPro	882
UniProtKB:A0A8M6Z271	InterPro	863
UniProtKB:A0A8M9P1G9	InterPro	883
UniProtKB:A0A8M9PAJ8	InterPro	864

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	arhgap42-201 (1) Ensembl	Ensembl		2,598 nt	Select Tool ZFIN BLAST
mRNA	arhgap42-202 (1) Ensembl	Ensembl		2,565 nt	Select Tool ZFIN BLAST
mRNA	arhgap42-203 (1) Ensembl	Ensembl		2,496 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations