Gene

susd5

ID

ZDB-GENE-120215-196

Name

sushi domain containing 5

Symbol

susd5 Nomenclature History

Previous Names

si:ch211-207c15.6

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have hyaluronic acid binding activity. Predicted to be involved in Notch signaling pathway. Predicted to localize to integral component of membrane. Orthologous to human SUSD5 (sushi domain containing 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With susd5 Human Ortholog

No data available

Associated With susd5 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000436	Sushi/SCR/CCP domain
Domain	IPR000538	Link domain
Homologous_superfamily	IPR016186	C-type lectin-like/link domain superfamily
Homologous_superfamily	IPR016187	C-type lectin fold
Homologous_superfamily	IPR035976	Sushi/SCR/CCP superfamily

Domain Details Per Protein

Protein	Length	C-type lectin fold	C-type lectin-like/link domain superfamily	Link domain	Sushi/SCR/CCP domain	Sushi/SCR/CCP superfamily
UniProtKB:A0A8M3ASV6 InterPro	635

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	susd5-201 (1) Ensembl	Havana	2379 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations