Gene
col12a1b
- ID
- ZDB-GENE-120215-116
- Name
- collagen, type XII, alpha 1b
- Symbol
- col12a1b Nomenclature History
- Previous Names
-
- si:ch211-106k22.1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Involved in regeneration and regulation of axon regeneration. Predicted to localize to collagen-containing extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Orthologous to human COL12A1 (collagen type XII alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001791 | Laminin G domain |
Domain | IPR002035 | von Willebrand factor, type A |
Domain | IPR003961 | Fibronectin type III |
Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
Protein | Length | Collagen triple helix repeat | Concanavalin A-like lectin/glucanase domain superfamily | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin-like fold | Laminin G domain | von Willebrand factor A-like domain superfamily | von Willebrand factor, type A |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:E7FG81
|
3643 | ||||||||
UniProtKB:I3ISL8
|
241 | ||||||||
UniProtKB:I3IT32
|
2208 |
Type | Name | Length (nt) | Analysis |
---|---|---|---|
mRNA |
col12a1b-202
(1)
|
721 nt | |
mRNA |
col12a1b-203
(1)
|
7011 nt |
Interactions and Pathways
No data available
Plasmids
No data available