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ZIRC
ZFIN ID: ZDB-GENE-120215-110
Gene Name: si:ch211-113j14.1
Gene Symbol: si:ch211-113j14.1    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have heme binding activity; iron ion binding activity; and oxidoreductase activity. Predicted to be involved in oxidation-reduction process. Human ortholog(s) of this gene implicated in cerebrotendinous xanthomatosis. Orthologous to human CYP27A1 (cytochrome P450 family 27 subfamily A member 1).
Genome Resources: Alliance (1),  Gene:558239 (1),  Ensembl(GRCz11):ENSDARG00000073764 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14141 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-113j14.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-113j14.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Molecular Function heme binding (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-113j14.1-201 (1)    Ensembl 1945
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-113j14.1 No data available
    MARKER RELATIONSHIPS
    si:ch211-113j14.1 Contained in: [BAC] CH211-113J14 (1) (order this), DKEY-32H20 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_681430 (1)
    Genomic GenBank:BX927387 (1) 175517 bp
    Select Tool
    Polypeptide UniProtKB:E7F3G8 (1) 573 aa
    Sequence Information (all 7)
    ORTHOLOGY for si:ch211-113j14.1 ( Chr: 6 )
    CITATIONS (13)