ZFIN ID: ZDB-GENE-110609-4
Gene Name: lysine (K)-specific demethylase 4A, genome duplicate a
Gene Symbol: kdm4aa    Nomenclature History

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Previous Name: si:ch211-215f22.3

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have histone demethylase activity (H3-K36 specific) and histone demethylase activity (H3-K9 specific). Predicted to be involved in chromatin remodeling. Predicted to localize to histone methyltransferase complex. Orthologous to human KDM4A (lysine demethylase 4A).
Genome Resources: Alliance (1),  Gene:100003413 (1),  Ensembl(GRCz11):ENSDARG00000018782 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33790 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38534 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40621 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45240 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-kdm4aa N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH kdm4aa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH kdm4aa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA kdm4aa-201 (1)    Ensembl 6611
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM kdm4aa No data available
    MARKER RELATIONSHIPS
    kdm4aa Contained in: [BAC] CH211-215F22
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_001921794 (1)
    Genomic GenBank:BX119315 (1) 210930 nt Blast at MegaBLAST
    Polypeptide UniProtKB:I3ITH4 (1) 2012 aa
    Sequence Information (all 11)
    ORTHOLOGY for kdm4aa ( Chr: 6 )
    CITATIONS (17)