ZFIN ID: ZDB-GENE-110411-73
Gene Name: transcription termination factor, RNA polymerase II
Gene Symbol: ttf2    Nomenclature History

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Previous Name: si:ch1073-303l5.1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have ATP binding activity and zinc ion binding activity. Orthologous to human TTF2 (transcription termination factor 2).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000104105 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16912 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41360 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ttf2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ttf2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ttf2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function ATP binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000330 SNF2-related, N-terminal domain
    Domain IPR001650 Helicase, C-terminal
    Domain IPR010666 Zinc finger, GRF-type
    Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
    Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
    Homologous_superfamily IPR038718 SNF2-like, N-terminal domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ttf2-202 (1)    Ensembl 3069
    ncRNA ttf2-003 (1)    Ensembl 655
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ttf2 No data available
    MARKER RELATIONSHIPS
    ttf2 Contained in: [Fosmid] CH1073-303L5 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CU693447 (1) 31175 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IFG3 (1) 1145 aa
    Sequence Information (all 3)
    ORTHOLOGY for ttf2 ( Chr: 9 )
    CITATIONS (13)