ZFIN ID: ZDB-GENE-110411-40
Gene Name: TRIO and F-actin binding protein a
Gene Symbol: triobpa    Nomenclature History

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Previous Name: si:ch211-133l11.8 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 28. Orthologous to human TRIOBP (TRIO and F-actin binding protein).
Genome Resources: Alliance (1),  Gene:555479 (1),  Ensembl(GRCz11):ENSDARG00000075870 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11631 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko1079b Insertion Unknown Unknown CRISPR
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH triobpa HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    autosomal recessive nonsyndromic deafness 28 Alliance Deafness, autosomal recessive 28 609823
    DISEASE ASSOCIATED WITH triobpa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001849 Pleckstrin homology domain
    Homologous_superfamily IPR011993 PH-like domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA triobpa-201 (1)    Ensembl 3161
    triobpa-202 (1)    Ensembl 2023
    ncRNA triobpa-002 (1) 414
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM triobpa No data available
    MARKER RELATIONSHIPS
    triobpa Contained in: [BAC] CH211-133L11 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005160161 (1) 2149 bp
    Genomic GenBank:AL929114 (1) 180158 bp
    Select Tool
    Polypeptide UniProtKB:E7F7U2 (1) 965 aa
    Sequence Information (all 8)
    ORTHOLOGY for triobpa ( Chr: 1 )
    CITATIONS (12)