ZFIN ID: ZDB-GENE-110407-5
Gene Name: forkhead box F2a
Gene Symbol: foxf2a    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in head mesenchyme; neural tube; pharyngeal arch 1; and pharyngeal arch 2. Orthologous to human FOXF2 (forkhead box F2).
Genome Resources: Alliance (1),  Gene:407681 (1),  Ensembl(GRCz11):ENSDARG00000017195 (2)
GENE EXPRESSION
All Expression Data: 6 figures from 5 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el616 Indel Unknown Unknown CRISPR
sa32818 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-foxf2a 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH foxf2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxf2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA foxf2a-201 (1)    Ensembl 2173
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM foxf2a No data available
    MARKER RELATIONSHIPS
    foxf2a Contained in: [Fosmid] CH1073-460D17 (1)
    foxf2a Encodes: [cDNA] MGC:162905
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001083815 (1) 1569 nt
    Genomic GenBank:CU856140 (1) 35054 nt
    Select Tool
    Polypeptide UniProtKB:A4IGF4 (1) 383 aa
    Sequence Information (all 10)
    ORTHOLOGY for foxf2a ( Chr: 2 )
    CITATIONS (25)