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General Information
ZIRC
ZFIN ID: ZDB-GENE-110406-2
Gene Name: collagen, type V, alpha 2b
Gene Symbol: col5a2b
Sequence Ontology ID : SO:0001217

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Previous Name: si:rp71-56k2.1

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to the extracellular matrix and extracellular  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH col5a2b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Ehlers-Danlos syndrome, classic type, 2 130010
DISEASE ASSOCIATED WITH col5a2b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process blood vessel development (more)
Cellular Component collagen type I trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 12)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA col5a2b-201 (1) 4896
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM col5a2b No data available
MARKER RELATIONSHIPS
col5a2b Contained in: [BAC] RP71-56K2 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_001919970 (1) 5440 bp
Genomic GenBank:BX640508 (1) 154639 bp
Select Tool
Polypeptide UniProtKB:E7FE47 (1) 1499 aa
Sequence Information (all 5)
ORTHOLOGY for col5a2b ( Chr: 6 )
CITATIONS (18)