ZFIN ID: ZDB-GENE-110328-1
Gene Name: neuronal pentraxin IIb
Gene Symbol: nptx2b
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in regulation of circadian rhythm and regulation of neuronal synaptic plasticity; orthologous to human NPTX2 (neuronal pentraxin 2).
GENE EXPRESSION
All Expression Data: 3 figures from Appelbaum et al., 2010
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nptx2b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nptx2b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of circadian rhythm (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001759 (1)
  • InterPro:IPR013320 (1)
  • InterPro:IPR030476 (1)
  • PROSITE:PS00289 (1)
  • PROSITE:PS51828 (1)
  • Pfam:PF00354 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nptx2b-201 (1) 1281
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nptx2b
    MARKER RELATIONSHIPS
    nptx2bContained in: [BAC] DKEY-256M7 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001171584 (1) 1281bp
    Genomic GenBank:BX571829 196942bp
    Select Tool
    Polypeptide UniProtKB:D2D0C0 (1) 426aa
    Sequence Clusters UniGene:158879 (1)
    Sequence Information (all 8)
    OTHER nptx2b GENE PAGES
  • Alliance (1)
  • Gene:556906 (1)
  • VEGA:OTTDARG00000025083 (1)
  • Ensembl(GRCz11):ENSDARG00000045164 (2)
  • ORTHOLOGY for nptx2b (Chr: 12)
    CITATIONS (12)